Analysis of Ligand-Protein Contacts in PDB entry:
3VDA

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 50 ligands in PDB entry 3VDA. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	MG	A	3001	1	MAGNESIUM ION
lig 2	MG	A	3002	1	MAGNESIUM ION
lig 3	NA	A	3101	1	SODIUM ION
lig 4	NA	A	3102	1	SODIUM ION
lig 5	NA	A	3103	1	SODIUM ION
lig 6	DMS	A	8001	4	DIMETHYL SULFOXIDE
lig 7	DMS	A	8002	4	DIMETHYL SULFOXIDE
lig 8	DMS	A	8003	4	DIMETHYL SULFOXIDE
lig 9	DMS	A	8004	4	DIMETHYL SULFOXIDE
lig 10	DMS	A	8005	4	DIMETHYL SULFOXIDE
lig 11	DMS	A	8006	4	DIMETHYL SULFOXIDE
lig 12	DMS	A	8007	4	DIMETHYL SULFOXIDE
lig 13	MG	B	3001	1	MAGNESIUM ION
lig 14	MG	B	3002	1	MAGNESIUM ION
lig 15	NA	B	3101	1	SODIUM ION
lig 16	NA	B	3102	1	SODIUM ION
lig 17	DMS	B	8001	4	DIMETHYL SULFOXIDE
lig 18	DMS	B	8002	4	DIMETHYL SULFOXIDE
lig 19	DMS	B	8003	4	DIMETHYL SULFOXIDE
lig 20	DMS	B	8004	4	DIMETHYL SULFOXIDE
lig 21	DMS	B	8005	4	DIMETHYL SULFOXIDE
lig 22	DMS	B	8006	4	DIMETHYL SULFOXIDE
lig 23	DMS	B	8007	4	DIMETHYL SULFOXIDE
lig 24	DMS	B	8008	4	DIMETHYL SULFOXIDE
lig 25	MG	C	3001	1	MAGNESIUM ION
lig 26	MG	C	3002	1	MAGNESIUM ION
lig 27	NA	C	3101	1	SODIUM ION
lig 28	NA	C	3102	1	SODIUM ION
lig 29	DMS	C	8001	4	DIMETHYL SULFOXIDE
lig 30	DMS	C	8002	4	DIMETHYL SULFOXIDE
lig 31	DMS	C	8003	4	DIMETHYL SULFOXIDE
lig 32	DMS	C	8004	4	DIMETHYL SULFOXIDE
lig 33	DMS	C	8005	4	DIMETHYL SULFOXIDE
lig 34	DMS	C	8006	4	DIMETHYL SULFOXIDE
lig 35	DMS	C	8007	4	DIMETHYL SULFOXIDE
lig 36	MG	D	3001	1	MAGNESIUM ION
lig 37	MG	D	3002	1	MAGNESIUM ION
lig 38	NA	D	3101	1	SODIUM ION
lig 39	NA	D	3102	1	SODIUM ION
lig 40	NA	D	3103	1	SODIUM ION
lig 41	DMS	D	8001	4	DIMETHYL SULFOXIDE
lig 42	DMS	D	8002	4	DIMETHYL SULFOXIDE
lig 43	DMS	D	8003	4	DIMETHYL SULFOXIDE
lig 44	DMS	D	8004	4	DIMETHYL SULFOXIDE
lig 45	DMS	D	8005	4	DIMETHYL SULFOXIDE
lig 46	DMS	D	8006	4	DIMETHYL SULFOXIDE
lig 47	DMS	D	8007	4	DIMETHYL SULFOXIDE
lig 48	DMS	D	8008	4	DIMETHYL SULFOXIDE
lig 49	DMS	D	8009	4	DIMETHYL SULFOXIDE
lig 50	DMS	D	8010	4	DIMETHYL SULFOXIDE

Analysis of Ligand-Protein Contacts in PDB entry: 3VDA

Analysis of Ligand-Protein Contacts in PDB entry:
3VDA