Analysis of Ligand-Protein Contacts in PDB entry:
3VGW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 3VGW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NVZ
A
1124 19 D]IMIDAZOL-4-YL]PENTANOIC ACID
lig 2
NAG
A
1125 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
SO4
A
1126 5SULFATE ION
lig 4
SO4
A
1127 5SULFATE ION
lig 5
NVZ
B
1124 19 D]IMIDAZOL-4-YL]PENTANOIC ACID
lig 6
NAG
B
1125 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
SO4
B
1126 5SULFATE ION
lig 8
NVZ
C
1124 19 D]IMIDAZOL-4-YL]PENTANOIC ACID
lig 9
NAG
C
1125 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
SO4
C
1126 5SULFATE ION
lig 11
SO4
C
1127 5SULFATE ION
lig 12
NVZ
D
1124 19 D]IMIDAZOL-4-YL]PENTANOIC ACID
lig 13
NAG
D
1125 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
SO4
D
1126 5SULFATE ION
lig 15
NVZ
E
1124 19 D]IMIDAZOL-4-YL]PENTANOIC ACID
lig 16
NAG
E
1125 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
SO4
E
1126 5SULFATE ION
lig 18
SO4
E
1127 5SULFATE ION
lig 19
NVZ
F
1124 19 D]IMIDAZOL-4-YL]PENTANOIC ACID
lig 20
NAG
F
1125 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
SO4
F
1126 5SULFATE ION
lig 22
NVZ
G
1124 19 D]IMIDAZOL-4-YL]PENTANOIC ACID
lig 23
NAG
G
1125 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
SO4
G
1126 5SULFATE ION
lig 25
SO4
G
1127 5SULFATE ION
lig 26
NVZ
H
1124 19 D]IMIDAZOL-4-YL]PENTANOIC ACID
lig 27
NAG
H
1125 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
SO4
H
1126 5SULFATE ION