Analysis of Ligand-Protein Contacts in PDB entry:
3VKG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 3VKG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ADP
A
9001 27ADENOSINE-5'-DIPHOSPHATE
lig 2
ADP
A
9002 27ADENOSINE-5'-DIPHOSPHATE
lig 3
ADP
A
9003 27ADENOSINE-5'-DIPHOSPHATE
lig 4
ADP
A
9004 27ADENOSINE-5'-DIPHOSPHATE
lig 5
SPM
A
9012 14SPERMINE
lig 6
SPM
A
9016 14SPERMINE
lig 7
MG
A
1 1MAGNESIUM ION
lig 8
ADP
B
9007 27ADENOSINE-5'-DIPHOSPHATE
lig 9
ADP
B
9008 27ADENOSINE-5'-DIPHOSPHATE
lig 10
ADP
B
9009 27ADENOSINE-5'-DIPHOSPHATE
lig 11
ADP
B
9010 27ADENOSINE-5'-DIPHOSPHATE
lig 12
SPM
B
9018 14SPERMINE
lig 13
SPM
B
9022 14SPERMINE
lig 14
MG
B
2 1MAGNESIUM ION
lig 15
MG
B
3 1MAGNESIUM ION