Analysis of Ligand-Protein Contacts in PDB entry:
3VKL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 3VKL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BGC
C
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
C
2 11BETA-D-GALACTOPYRANOSE
lig 3
BGC
D
1 12BETA-D-GLUCOPYRANOSE
lig 4
GAL
D
2 11BETA-D-GALACTOPYRANOSE
lig 5
BGC
E
1 12BETA-D-GLUCOPYRANOSE
lig 6
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 7
BGC
F
1 12BETA-D-GLUCOPYRANOSE
lig 8
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 9
EDO
A
405 41,2-ETHANEDIOL
lig 10
EDO
A
406 41,2-ETHANEDIOL
lig 11
EDO
A
407 41,2-ETHANEDIOL
lig 12
EDO
A
408 41,2-ETHANEDIOL
lig 13
EDO
A
409 41,2-ETHANEDIOL
lig 14
EDO
A
410 41,2-ETHANEDIOL
lig 15
EDO
A
411 41,2-ETHANEDIOL
lig 16
EDO
A
412 41,2-ETHANEDIOL
lig 17
EDO
A
413 41,2-ETHANEDIOL
lig 18
EDO
A
414 41,2-ETHANEDIOL
lig 19
EDO
A
415 41,2-ETHANEDIOL
lig 20
EDO
A
416 41,2-ETHANEDIOL
lig 21
EDO
B
405 41,2-ETHANEDIOL
lig 22
EDO
B
406 41,2-ETHANEDIOL
lig 23
EDO
B
407 41,2-ETHANEDIOL
lig 24
EDO
B
408 41,2-ETHANEDIOL
lig 25
EDO
B
409 41,2-ETHANEDIOL
lig 26
EDO
B
410 41,2-ETHANEDIOL
lig 27
EDO
B
411 41,2-ETHANEDIOL
lig 28
EDO
B
412 41,2-ETHANEDIOL