Analysis of Ligand-Protein Contacts in PDB entry:
3VLW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 3VLW. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
LGU
C
1 13ALPHA-L-GULOPYRANURONIC ACID
lig 2
BEM
C
2 12BETA-D-MANNOPYRANURONIC ACID
lig 3
LGU
D
1 13ALPHA-L-GULOPYRANURONIC ACID
lig 4
BEM
D
2 12BETA-D-MANNOPYRANURONIC ACID
lig 5
CA
A
503 1CALCIUM ION
lig 6
GOL
A
506 6GLYCEROL
lig 7
GOL
A
507 6GLYCEROL
lig 8
GOL
A
508 6GLYCEROL
lig 9
GOL
A
509 6GLYCEROL
lig 10
GOL
A
510 6GLYCEROL
lig 11
GOL
A
511 6GLYCEROL
lig 12
GOL
A
512 6GLYCEROL
lig 13
CA
B
503 1CALCIUM ION
lig 14
GOL
B
506 6GLYCEROL
lig 15
GOL
B
507 6GLYCEROL
lig 16
GOL
B
508 6GLYCEROL
lig 17
GOL
B
509 6GLYCEROL
lig 18
GOL
B
510 6GLYCEROL
lig 19
GOL
B
511 6GLYCEROL
lig 20
GOL
B
512 6GLYCEROL
lig 21
GOL
B
513 6GLYCEROL
lig 22
GOL
B
514 6GLYCEROL
lig 23
GOL
B
515 6GLYCEROL
lig 24
GOL
B
516 6GLYCEROL