Analysis of Ligand-Protein Contacts in PDB entry:
3VMH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3VMH. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FE2
A
501 1FE (II) ION
lig 2
FES
A
401 4FE2/S2 (INORGANIC) CLUSTER
lig 3
OXY
A
601 2OXYGEN MOLECULE
lig 4
FE2
B
501 1FE (II) ION
lig 5
FES
B
401 4FE2/S2 (INORGANIC) CLUSTER
lig 6
OXY
B
602 2OXYGEN MOLECULE
lig 7
FE2
C
501 1FE (II) ION
lig 8
FES
C
401 4FE2/S2 (INORGANIC) CLUSTER
lig 9
OXY
C
603 2OXYGEN MOLECULE
lig 10
FES
D
201 4FE2/S2 (INORGANIC) CLUSTER
lig 11
FES
E
201 4FE2/S2 (INORGANIC) CLUSTER
lig 12
FES
F
201 4FE2/S2 (INORGANIC) CLUSTER