Analysis of Ligand-Protein Contacts in PDB entry:
3VSD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 5 ligands in PDB entry 3VSD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PLP
A
401 15PYRIDOXAL-5'-PHOSPHATE
lig 2
OAS
A
402 10O-ACETYLSERINE
lig 3
MPD
A
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
PLP
B
401 15PYRIDOXAL-5'-PHOSPHATE
lig 5
OAS
B
402 10O-ACETYLSERINE