Analysis of Ligand-Protein Contacts in PDB entry:
3VVK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 3VVK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
RET
A
301 20RETINAL
lig 2
BNG
A
302 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 3
BNG
A
303 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 4
RET
B
301 20RETINAL
lig 5
BNG
B
302 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 6
RET
C
301 20RETINAL
lig 7
22B
C
302 27BACTERIORUBERIN
lig 8
L3P
C
303 20 GLYCEROL-1'-PHOSPHATE
lig 9
L3P
C
304 20 GLYCEROL-1'-PHOSPHATE
lig 10
L3P
D
302 20 GLYCEROL-1'-PHOSPHATE
lig 11
BNG
D
304 21NONYL BETA-D-GLUCOPYRANOSIDE
lig 12
22B
E
302 27BACTERIORUBERIN
lig 13
L3P
E
303 20 GLYCEROL-1'-PHOSPHATE