Analysis of Ligand-Protein Contacts in PDB entry:
3W09


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 3W09. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
B
8 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
B
9 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
512 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
GOL
A
513 6GLYCEROL
lig 14
GOL
A
514 6GLYCEROL
lig 15
GOL
A
515 6GLYCEROL
lig 16
GOL
A
516 6GLYCEROL
lig 17
GOL
A
517 6GLYCEROL
lig 18
GOL
A
518 6GLYCEROL
lig 19
GOL
A
519 6GLYCEROL
lig 20
ZGE
A
520 24 ACID
lig 21
CA
A
521 1CALCIUM ION