Analysis of Ligand-Protein Contacts in PDB entry:
3WKN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 72 ligands in PDB entry 3WKN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
Q
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
Q
6 11BETA-D-GALACTOPYRANOSE
lig 7
MAN
Q
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
Q
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
FUC
Q
9 10ALPHA-L-FUCOPYRANOSE
lig 10
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
R
4 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
R
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
GAL
R
6 11BETA-D-GALACTOPYRANOSE
lig 16
MAN
R
7 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
R
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
FUC
R
9 10ALPHA-L-FUCOPYRANOSE
lig 19
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
S
4 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
S
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
GAL
S
6 11BETA-D-GALACTOPYRANOSE
lig 25
MAN
S
7 11ALPHA-D-MANNOPYRANOSE
lig 26
NAG
S
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
FUC
S
9 10ALPHA-L-FUCOPYRANOSE
lig 28
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 31
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
T
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
GAL
T
6 11BETA-D-GALACTOPYRANOSE
lig 34
MAN
T
7 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
T
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
FUC
T
9 10ALPHA-L-FUCOPYRANOSE
lig 37
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 40
MAN
U
4 11ALPHA-D-MANNOPYRANOSE
lig 41
NAG
U
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
GAL
U
6 11BETA-D-GALACTOPYRANOSE
lig 43
MAN
U
7 11ALPHA-D-MANNOPYRANOSE
lig 44
NAG
U
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
FUC
U
9 10ALPHA-L-FUCOPYRANOSE
lig 46
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 49
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 50
NAG
V
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
GAL
V
6 11BETA-D-GALACTOPYRANOSE
lig 52
MAN
V
7 11ALPHA-D-MANNOPYRANOSE
lig 53
NAG
V
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
FUC
V
9 10ALPHA-L-FUCOPYRANOSE
lig 55
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 58
MAN
W
4 11ALPHA-D-MANNOPYRANOSE
lig 59
NAG
W
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
GAL
W
6 11BETA-D-GALACTOPYRANOSE
lig 61
MAN
W
7 11ALPHA-D-MANNOPYRANOSE
lig 62
NAG
W
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
FUC
W
9 10ALPHA-L-FUCOPYRANOSE
lig 64
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 67
MAN
X
4 11ALPHA-D-MANNOPYRANOSE
lig 68
NAG
X
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
GAL
X
6 11BETA-D-GALACTOPYRANOSE
lig 70
MAN
X
7 11ALPHA-D-MANNOPYRANOSE
lig 71
NAG
X
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
FUC
X
9 10ALPHA-L-FUCOPYRANOSE