Analysis of Ligand-Protein Contacts in PDB entry:
3WMQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 3WMQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
A2G
A
1003 152-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 4
MPD
A
1004 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MPD
A
1005 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
CL
A
1006 1CHLORIDE ION
lig 7
CL
A
1007 1CHLORIDE ION
lig 8
CL
A
1008 1CHLORIDE ION
lig 9
CL
A
1009 1CHLORIDE ION
lig 10
NA
A
1010 1SODIUM ION