Analysis of Ligand-Protein Contacts in PDB entry:
4AVV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 65 ligands in PDB entry 4AVV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
G
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
GAL
G
6 11BETA-D-GALACTOPYRANOSE
lig 9
SIA
G
7 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
G
9 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
GAL
G
10 11BETA-D-GALACTOPYRANOSE
lig 13
SIA
G
11 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 14
ACT
A
1205 4ACETATE ION
lig 15
ACT
A
1206 4ACETATE ION
lig 16
GHE
A
1207 24 OXIDANYLIDENE-HEXANOYL]PYRROLIDINE-2-CARB
lig 17
ACT
A
1208 4ACETATE ION
lig 18
CD
A
1209 1CADMIUM ION
lig 19
CD
A
1210 1CADMIUM ION
lig 20
CD
A
1211 1CADMIUM ION
lig 21
CD
A
1212 1CADMIUM ION
lig 22
CD
A
1213 1CADMIUM ION
lig 23
NAG
A
1214 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
ACT
A
1215 4ACETATE ION
lig 25
CD
A
1216 1CADMIUM ION
lig 26
CD
A
1218 1CADMIUM ION
lig 27
CD
A
1219 1CADMIUM ION
lig 28
GHE
B
1207 24 OXIDANYLIDENE-HEXANOYL]PYRROLIDINE-2-CARB
lig 29
ACT
B
1208 4ACETATE ION
lig 30
CD
B
1209 1CADMIUM ION
lig 31
CD
B
1210 1CADMIUM ION
lig 32
CD
B
1211 1CADMIUM ION
lig 33
CD
B
1212 1CADMIUM ION
lig 34
SIA
B
1213 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 35
CD
B
1214 1CADMIUM ION
lig 36
CD
B
1215 1CADMIUM ION
lig 37
CD
B
1216 1CADMIUM ION
lig 38
CD
C
1205 1CADMIUM ION
lig 39
CD
C
1206 1CADMIUM ION
lig 40
GHE
C
1207 24 OXIDANYLIDENE-HEXANOYL]PYRROLIDINE-2-CARB
lig 41
CD
C
1208 1CADMIUM ION
lig 42
NAG
C
1209 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
CD
C
1210 1CADMIUM ION
lig 44
CD
C
1211 1CADMIUM ION
lig 45
CD
C
1212 1CADMIUM ION
lig 46
GHE
D
1207 24 OXIDANYLIDENE-HEXANOYL]PYRROLIDINE-2-CARB
lig 47
CD
D
6040 1CADMIUM ION
lig 48
CD
D
6041 1CADMIUM ION
lig 49
CD
D
6042 1CADMIUM ION
lig 50
CD
D
6043 1CADMIUM ION
lig 51
CD
D
6044 1CADMIUM ION
lig 52
ACT
E
1206 4ACETATE ION
lig 53
GHE
E
1207 24 OXIDANYLIDENE-HEXANOYL]PYRROLIDINE-2-CARB
lig 54
CD
E
1208 1CADMIUM ION
lig 55
CD
E
1209 1CADMIUM ION
lig 56
CD
E
1210 1CADMIUM ION
lig 57
CD
E
1211 1CADMIUM ION
lig 58
CD
E
1212 1CADMIUM ION
lig 59
NAG
E
1213 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
ACT
E
1214 4ACETATE ION
lig 61
ACT
E
1215 4ACETATE ION
lig 62
CD
E
1216 1CADMIUM ION
lig 63
CD
E
1217 1CADMIUM ION
lig 64
CD
E
1218 1CADMIUM ION
lig 65
CD
E
1219 1CADMIUM ION