Analysis of Ligand-Protein Contacts in PDB entry:
4D4U


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 4D4U. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CSX
A
244 7S-OXY CYSTEINE
lig 2
CSX
B
244 7S-OXY CYSTEINE
lig 3
NAG
C
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
GAL
C
2 11BETA-D-GALACTOPYRANOSE
lig 5
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
D
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
GAL
D
2 11BETA-D-GALACTOPYRANOSE
lig 8
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 9
NDG
E
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 10
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 11
FUC
E
3 10ALPHA-L-FUCOPYRANOSE
lig 12
FUC
E
4 10ALPHA-L-FUCOPYRANOSE
lig 13
NDG
F
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 14
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 15
FUC
F
3 10ALPHA-L-FUCOPYRANOSE
lig 16
FUC
F
4 10ALPHA-L-FUCOPYRANOSE
lig 17
NAG
G
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 19
FUC
G
3 10ALPHA-L-FUCOPYRANOSE
lig 20
NAG
H
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 22
FUC
H
3 10ALPHA-L-FUCOPYRANOSE
lig 23
NDG
I
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 24
GAL
I
2 11BETA-D-GALACTOPYRANOSE
lig 25
FUC
I
3 10ALPHA-L-FUCOPYRANOSE
lig 26
FUC
I
4 10ALPHA-L-FUCOPYRANOSE
lig 27
GAL
J
1 12BETA-D-GALACTOPYRANOSE
lig 28
FUC
J
2 10ALPHA-L-FUCOPYRANOSE
lig 29
GOL
A
940 6GLYCEROL
lig 30
GOL
A
941 6GLYCEROL
lig 31
FUC
A
950 11ALPHA-L-FUCOPYRANOSE
lig 32
FUC
B
950 11ALPHA-L-FUCOPYRANOSE