Analysis of Ligand-Protein Contacts in PDB entry:
4DU6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 4DU6. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
301 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
GOL
A
302 6GLYCEROL
lig 3
GOL
B
301 6GLYCEROL
lig 4
PEG
B
302 7DI(HYDROXYETHYL)ETHER
lig 5
TRS
B
303 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 6
GTP
B
304 32GUANOSINE-5'-TRIPHOSPHATE
lig 7
CA
B
305 1CALCIUM ION
lig 8
GOL
C
301 6GLYCEROL
lig 9
GTP
C
302 32GUANOSINE-5'-TRIPHOSPHATE
lig 10
TRS
C
303 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 11
CA
C
304 1CALCIUM ION
lig 12
GOL
C
305 6GLYCEROL
lig 13
GOL
C
306 6GLYCEROL
lig 14
GOL
D
301 6GLYCEROL
lig 15
GTP
D
302 32GUANOSINE-5'-TRIPHOSPHATE
lig 16
TRS
D
303 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 17
CA
D
304 1CALCIUM ION
lig 18
GOL
E
301 6GLYCEROL
lig 19
GTP
E
302 32GUANOSINE-5'-TRIPHOSPHATE