Analysis of Ligand-Protein Contacts in PDB entry:
4GLS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 290 ligands in PDB entry 4GLS. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DGL
A
6 9D-GLUTAMIC ACID
lig 2
DVA
A
7 7D-VALINE
lig 3
DVA
A
8 7D-VALINE
lig 4
DLY
A
9 9D-LYSINE
lig 5
DPN
A
10 11D-PHENYLALANINE
lig 6
MED
A
11 8D-METHIONINE
lig 7
DAS
A
12 8D-ASPARTIC ACID
lig 8
DVA
A
13 7D-VALINE
lig 9
DTY
A
14 12D-TYROSINE
lig 10
DGN
A
15 9D-GLUTAMINE
lig 11
DAR
A
16 11D-ARGININE
lig 12
DSN
A
17 6D-SERINE
lig 13
DTY
A
18 12D-TYROSINE
lig 14
DCY
A
19 6D-CYSTEINE
lig 15
DHI
A
20 10D-HISTIDINE
lig 16
DPR
A
21 7D-PROLINE
lig 17
DIL
A
22 8D-ISOLEUCINE
lig 18
DGL
A
23 9D-GLUTAMIC ACID
lig 19
DTH
A
24 7D-THREONINE
lig 20
DLE
A
25 8D-LEUCINE
lig 21
DVA
A
26 7D-VALINE
lig 22
DAS
A
27 8D-ASPARTIC ACID
lig 23
DIL
A
28 8D-ISOLEUCINE
lig 24
DPN
A
29 11D-PHENYLALANINE
lig 25
DGN
A
30 9D-GLUTAMINE
lig 26
DGL
A
31 9D-GLUTAMIC ACID
lig 27
DTY
A
32 12D-TYROSINE
lig 28
DPR
A
33 7D-PROLINE
lig 29
DAS
A
34 8D-ASPARTIC ACID
lig 30
DGL
A
35 9D-GLUTAMIC ACID
lig 31
DIL
A
36 8D-ISOLEUCINE
lig 32
DGL
A
37 9D-GLUTAMIC ACID
lig 33
DTY
A
38 12D-TYROSINE
lig 34
DIL
A
39 8D-ISOLEUCINE
lig 35
DPN
A
40 11D-PHENYLALANINE
lig 36
DLY
A
41 9D-LYSINE
lig 37
DPR
A
42 7D-PROLINE
lig 38
DSN
A
43 6D-SERINE
lig 39
DCY
A
44 6D-CYSTEINE
lig 40
DVA
A
45 7D-VALINE
lig 41
DPR
A
46 7D-PROLINE
lig 42
DLE
A
47 8D-LEUCINE
lig 43
MED
A
48 8D-METHIONINE
lig 44
DAR
A
49 11D-ARGININE
lig 45
DCY
A
50 6D-CYSTEINE
lig 46
DCY
A
53 6D-CYSTEINE
lig 47
DCY
A
54 6D-CYSTEINE
lig 48
DSG
A
55 8D-ASPARAGINE
lig 49
DAS
A
56 8D-ASPARTIC ACID
lig 50
DGL
A
57 9D-GLUTAMIC ACID
lig 51
DLE
A
59 8D-LEUCINE
lig 52
DGL
A
60 9D-GLUTAMIC ACID
lig 53
DCY
A
61 6D-CYSTEINE
lig 54
DVA
A
62 7D-VALINE
lig 55
DPR
A
63 7D-PROLINE
lig 56
DTH
A
64 7D-THREONINE
lig 57
DGL
A
65 9D-GLUTAMIC ACID
lig 58
DGL
A
66 9D-GLUTAMIC ACID
lig 59
DSN
A
67 6D-SERINE
lig 60
DSG
A
68 8D-ASPARAGINE
lig 61
DIL
A
69 8D-ISOLEUCINE
lig 62
DTH
A
70 7D-THREONINE
lig 63
MED
A
71 8D-METHIONINE
lig 64
DGN
A
72 9D-GLUTAMINE
lig 65
DIL
A
73 8D-ISOLEUCINE
lig 66
MED
A
74 8D-METHIONINE
lig 67
DAR
A
75 11D-ARGININE
lig 68
DIL
A
76 8D-ISOLEUCINE
lig 69
DLY
A
77 9D-LYSINE
lig 70
DPR
A
78 7D-PROLINE
lig 71
DHI
A
79 10D-HISTIDINE
lig 72
DGN
A
80 9D-GLUTAMINE
lig 73
DGN
A
82 9D-GLUTAMINE
lig 74
DHI
A
83 10D-HISTIDINE
lig 75
DIL
A
84 8D-ISOLEUCINE
lig 76
DGL
A
86 9D-GLUTAMIC ACID
lig 77
MED
A
87 8D-METHIONINE
lig 78
DSN
A
88 6D-SERINE
lig 79
DPN
A
89 11D-PHENYLALANINE
lig 80
DLE
A
90 8D-LEUCINE
lig 81
DGN
A
91 9D-GLUTAMINE
lig 82
DHI
A
92 10D-HISTIDINE
lig 83
DSG
A
93 8D-ASPARAGINE
lig 84
DLY
A
94 9D-LYSINE
lig 85
DCY
A
95 6D-CYSTEINE
lig 86
DGL
A
96 9D-GLUTAMIC ACID
lig 87
DCY
A
97 6D-CYSTEINE
lig 88
DAR
A
98 11D-ARGININE
lig 89
DPR
A
99 7D-PROLINE
lig 90
DLY
A
100 9D-LYSINE
lig 91
DGL
B
6 9D-GLUTAMIC ACID
lig 92
DVA
B
7 7D-VALINE
lig 93
DVA
B
8 7D-VALINE
lig 94
DLY
B
9 9D-LYSINE
lig 95
DPN
B
10 11D-PHENYLALANINE
lig 96
MED
B
11 8D-METHIONINE
lig 97
DAS
B
12 8D-ASPARTIC ACID
lig 98
DVA
B
13 7D-VALINE
lig 99
DTY
B
14 12D-TYROSINE
lig 100
DGN
B
15 9D-GLUTAMINE
lig 101
DAR
B
16 11D-ARGININE
lig 102
DSN
B
17 6D-SERINE
lig 103
DTY
B
18 12D-TYROSINE
lig 104
DCY
B
19 6D-CYSTEINE
lig 105
DHI
B
20 10D-HISTIDINE
lig 106
DPR
B
21 7D-PROLINE
lig 107
DIL
B
22 8D-ISOLEUCINE
lig 108
DGL
B
23 9D-GLUTAMIC ACID
lig 109
DTH
B
24 7D-THREONINE
lig 110
DLE
B
25 8D-LEUCINE
lig 111
DVA
B
26 7D-VALINE
lig 112
DAS
B
27 8D-ASPARTIC ACID
lig 113
DIL
B
28 8D-ISOLEUCINE
lig 114
DPN
B
29 11D-PHENYLALANINE
lig 115
DGN
B
30 9D-GLUTAMINE
lig 116
DGL
B
31 9D-GLUTAMIC ACID
lig 117
DTY
B
32 12D-TYROSINE
lig 118
DPR
B
33 7D-PROLINE
lig 119
DAS
B
34 8D-ASPARTIC ACID
lig 120
DGL
B
35 9D-GLUTAMIC ACID
lig 121
DIL
B
36 8D-ISOLEUCINE
lig 122
DGL
B
37 9D-GLUTAMIC ACID
lig 123
DTY
B
38 12D-TYROSINE
lig 124
DIL
B
39 8D-ISOLEUCINE
lig 125
DPN
B
40 11D-PHENYLALANINE
lig 126
DLY
B
41 9D-LYSINE
lig 127
DPR
B
42 7D-PROLINE
lig 128
DSN
B
43 6D-SERINE
lig 129
DCY
B
44 6D-CYSTEINE
lig 130
DVA
B
45 7D-VALINE
lig 131
DPR
B
46 7D-PROLINE
lig 132
DLE
B
47 8D-LEUCINE
lig 133
MED
B
48 8D-METHIONINE
lig 134
DAR
B
49 11D-ARGININE
lig 135
DCY
B
50 6D-CYSTEINE
lig 136
DCY
B
53 6D-CYSTEINE
lig 137
DCY
B
54 6D-CYSTEINE
lig 138
DSG
B
55 8D-ASPARAGINE
lig 139
DAS
B
56 8D-ASPARTIC ACID
lig 140
DGL
B
57 9D-GLUTAMIC ACID
lig 141
DLE
B
59 8D-LEUCINE
lig 142
DGL
B
60 9D-GLUTAMIC ACID
lig 143
DCY
B
61 6D-CYSTEINE
lig 144
DVA
B
62 7D-VALINE
lig 145
DPR
B
63 7D-PROLINE
lig 146
DTH
B
64 7D-THREONINE
lig 147
DGL
B
65 9D-GLUTAMIC ACID
lig 148
DGL
B
66 9D-GLUTAMIC ACID
lig 149
DSN
B
67 6D-SERINE
lig 150
DSG
B
68 8D-ASPARAGINE
lig 151
DIL
B
69 8D-ISOLEUCINE
lig 152
DTH
B
70 7D-THREONINE
lig 153
MED
B
71 8D-METHIONINE
lig 154
DGN
B
72 9D-GLUTAMINE
lig 155
DIL
B
73 8D-ISOLEUCINE
lig 156
MED
B
74 8D-METHIONINE
lig 157
DAR
B
75 11D-ARGININE
lig 158
DIL
B
76 8D-ISOLEUCINE
lig 159
DLY
B
77 9D-LYSINE
lig 160
DPR
B
78 7D-PROLINE
lig 161
DHI
B
79 10D-HISTIDINE
lig 162
DGN
B
80 9D-GLUTAMINE
lig 163
DGN
B
82 9D-GLUTAMINE
lig 164
DHI
B
83 10D-HISTIDINE
lig 165
DIL
B
84 8D-ISOLEUCINE
lig 166
DGL
B
86 9D-GLUTAMIC ACID
lig 167
MED
B
87 8D-METHIONINE
lig 168
DSN
B
88 6D-SERINE
lig 169
DPN
B
89 11D-PHENYLALANINE
lig 170
DLE
B
90 8D-LEUCINE
lig 171
DGN
B
91 9D-GLUTAMINE
lig 172
DHI
B
92 10D-HISTIDINE
lig 173
DSG
B
93 8D-ASPARAGINE
lig 174
DLY
B
94 9D-LYSINE
lig 175
DCY
B
95 6D-CYSTEINE
lig 176
DGL
B
96 9D-GLUTAMIC ACID
lig 177
DCY
B
97 6D-CYSTEINE
lig 178
DAR
B
98 11D-ARGININE
lig 179
DPR
B
99 7D-PROLINE
lig 180
DLY
B
100 9D-LYSINE
lig 181
DTH
D
1 7D-THREONINE
lig 182
DTY
D
2 12D-TYROSINE
lig 183
DLY
D
3 9D-LYSINE
lig 184
DLE
D
4 8D-LEUCINE
lig 185
DIL
D
5 8D-ISOLEUCINE
lig 186
DLE
D
6 8D-LEUCINE
lig 187
DSG
D
7 8D-ASPARAGINE
lig 188
DLY
D
9 9D-LYSINE
lig 189
DTH
D
10 7D-THREONINE
lig 190
DLE
D
11 8D-LEUCINE
lig 191
DLY
D
12 9D-LYSINE
lig 192
DGL
D
14 9D-GLUTAMIC ACID
lig 193
DTH
D
15 7D-THREONINE
lig 194
DTH
D
16 7D-THREONINE
lig 195
DTH
D
17 7D-THREONINE
lig 196
DGL
D
18 9D-GLUTAMIC ACID
lig 197
DAL
D
19 5D-ALANINE
lig 198
DVA
D
20 7D-VALINE
lig 199
DAS
D
21 8D-ASPARTIC ACID
lig 200
DVA
D
22 7D-VALINE
lig 201
DPN
D
23 11D-PHENYLALANINE
lig 202
DAS
D
24 8D-ASPARTIC ACID
lig 203
DAL
D
25 5D-ALANINE
lig 204
DPN
D
26 11D-PHENYLALANINE
lig 205
DAS
D
27 8D-ASPARTIC ACID
lig 206
DVA
D
28 7D-VALINE
lig 207
DPN
D
29 11D-PHENYLALANINE
lig 208
DPN
D
30 11D-PHENYLALANINE
lig 209
DVA
D
31 7D-VALINE
lig 210
DTY
D
32 12D-TYROSINE
lig 211
DAL
D
33 5D-ALANINE
lig 212
DAL
D
34 5D-ALANINE
lig 213
DSN
D
35 6D-SERINE
lig 214
DSG
D
36 8D-ASPARAGINE
lig 215
DPN
D
37 11D-PHENYLALANINE
lig 216
DSN
D
38 6D-SERINE
lig 217
DAS
D
39 8D-ASPARTIC ACID
lig 218
DPN
D
40 11D-PHENYLALANINE
lig 219
DAS
D
41 8D-ASPARTIC ACID
lig 220
DAS
D
42 8D-ASPARTIC ACID
lig 221
DTR
D
43 14D-TRYPTOPHAN
lig 222
DTH
D
44 7D-THREONINE
lig 223
DTY
D
45 12D-TYROSINE
lig 224
DAS
D
46 8D-ASPARTIC ACID
lig 225
DAS
D
47 8D-ASPARTIC ACID
lig 226
DAL
D
48 5D-ALANINE
lig 227
DTH
D
49 7D-THREONINE
lig 228
DLY
D
50 9D-LYSINE
lig 229
DTH
D
51 7D-THREONINE
lig 230
DPN
D
52 11D-PHENYLALANINE
lig 231
DTH
D
53 7D-THREONINE
lig 232
DVA
D
54 7D-VALINE
lig 233
DTH
D
55 7D-THREONINE
lig 234
DGL
D
56 10D-GLUTAMIC ACID
lig 235
DTH
H
1 7D-THREONINE
lig 236
DTY
H
2 12D-TYROSINE
lig 237
DLY
H
3 9D-LYSINE
lig 238
DLE
H
4 8D-LEUCINE
lig 239
DIL
H
5 8D-ISOLEUCINE
lig 240
DLE
H
6 8D-LEUCINE
lig 241
DSG
H
7 8D-ASPARAGINE
lig 242
DLY
H
9 9D-LYSINE
lig 243
DTH
H
10 7D-THREONINE
lig 244
DLE
H
11 8D-LEUCINE
lig 245
DLY
H
12 9D-LYSINE
lig 246
DGL
H
14 9D-GLUTAMIC ACID
lig 247
DTH
H
15 7D-THREONINE
lig 248
DTH
H
16 7D-THREONINE
lig 249
DTH
H
17 7D-THREONINE
lig 250
DGL
H
18 9D-GLUTAMIC ACID
lig 251
DAL
H
19 5D-ALANINE
lig 252
DVA
H
20 7D-VALINE
lig 253
DAS
H
21 8D-ASPARTIC ACID
lig 254
DVA
H
22 7D-VALINE
lig 255
DPN
H
23 11D-PHENYLALANINE
lig 256
DAS
H
24 8D-ASPARTIC ACID
lig 257
DAL
H
25 5D-ALANINE
lig 258
DPN
H
26 11D-PHENYLALANINE
lig 259
DAS
H
27 8D-ASPARTIC ACID
lig 260
DVA
H
28 7D-VALINE
lig 261
DPN
H
29 11D-PHENYLALANINE
lig 262
DPN
H
30 11D-PHENYLALANINE
lig 263
DVA
H
31 7D-VALINE
lig 264
DTY
H
32 12D-TYROSINE
lig 265
DAL
H
33 5D-ALANINE
lig 266
DAL
H
34 5D-ALANINE
lig 267
DSN
H
35 6D-SERINE
lig 268
DSG
H
36 8D-ASPARAGINE
lig 269
DPN
H
37 11D-PHENYLALANINE
lig 270
DSN
H
38 6D-SERINE
lig 271
DAS
H
39 8D-ASPARTIC ACID
lig 272
DPN
H
40 11D-PHENYLALANINE
lig 273
DAS
H
41 8D-ASPARTIC ACID
lig 274
DAS
H
42 8D-ASPARTIC ACID
lig 275
DTR
H
43 14D-TRYPTOPHAN
lig 276
DTH
H
44 7D-THREONINE
lig 277
DTY
H
45 12D-TYROSINE
lig 278
DAS
H
46 8D-ASPARTIC ACID
lig 279
DAS
H
47 8D-ASPARTIC ACID
lig 280
DAL
H
48 5D-ALANINE
lig 281
DTH
H
49 7D-THREONINE
lig 282
DLY
H
50 9D-LYSINE
lig 283
DTH
H
51 7D-THREONINE
lig 284
DPN
H
52 11D-PHENYLALANINE
lig 285
DTH
H
53 7D-THREONINE
lig 286
DVA
H
54 7D-VALINE
lig 287
DTH
H
55 7D-THREONINE
lig 288
DGL
H
56 10D-GLUTAMIC ACID
lig 289
PEG
A
201 7DI(HYDROXYETHYL)ETHER
lig 290
GOL
F
201 6GLYCEROL