Analysis of Ligand-Protein Contacts in PDB entry:
4IIB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 96 ligands in PDB entry 4IIB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
F
10 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 25
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 28
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 30
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 35
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 37
MAN
I
6 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
I
7 11ALPHA-D-MANNOPYRANOSE
lig 39
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 42
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 43
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
J
6 11ALPHA-D-MANNOPYRANOSE
lig 45
MAN
J
7 11ALPHA-D-MANNOPYRANOSE
lig 46
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 49
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 52
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 53
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 54
MAN
L
6 11ALPHA-D-MANNOPYRANOSE
lig 55
MAN
L
7 11ALPHA-D-MANNOPYRANOSE
lig 56
MAN
L
8 11ALPHA-D-MANNOPYRANOSE
lig 57
MAN
L
9 11ALPHA-D-MANNOPYRANOSE
lig 58
MAN
L
10 11ALPHA-D-MANNOPYRANOSE
lig 59
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 62
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 65
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 66
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 67
MAN
N
6 11ALPHA-D-MANNOPYRANOSE
lig 68
MAN
N
7 11ALPHA-D-MANNOPYRANOSE
lig 69
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 72
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 73
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 74
MAN
O
6 11ALPHA-D-MANNOPYRANOSE
lig 75
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 78
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 79
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 80
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 81
MAN
P
7 11ALPHA-D-MANNOPYRANOSE
lig 82
MAN
P
8 11ALPHA-D-MANNOPYRANOSE
lig 83
NAG
A
907 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
NAG
A
940 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 85
MPD
A
941 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 86
MRD
A
942 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 87
MRD
A
943 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 88
NA
A
944 1SODIUM ION
lig 89
ACY
A
945 4ACETIC ACID
lig 90
NAG
B
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
NAG
B
946 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 92
MRD
B
947 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 93
MRD
B
948 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 94
MRD
B
949 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 95
NA
B
950 1SODIUM ION
lig 96
ACY
B
951 4ACETIC ACID