Analysis of Ligand-Protein Contacts in PDB entry:
4IIF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 89 ligands in PDB entry 4IIF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 8
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
F
10 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 23
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
H
7 11ALPHA-D-MANNOPYRANOSE
lig 30
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 33
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
I
6 11ALPHA-D-MANNOPYRANOSE
lig 36
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 39
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 40
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 41
MAN
J
6 11ALPHA-D-MANNOPYRANOSE
lig 42
MAN
J
7 11ALPHA-D-MANNOPYRANOSE
lig 43
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 46
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 47
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 52
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 53
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 54
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 55
MAN
M
7 11ALPHA-D-MANNOPYRANOSE
lig 56
MAN
M
8 11ALPHA-D-MANNOPYRANOSE
lig 57
MAN
M
9 11ALPHA-D-MANNOPYRANOSE
lig 58
MAN
M
10 11ALPHA-D-MANNOPYRANOSE
lig 59
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 62
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 65
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 66
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 67
MAN
O
6 11ALPHA-D-MANNOPYRANOSE
lig 68
MAN
O
7 11ALPHA-D-MANNOPYRANOSE
lig 69
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 72
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 73
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 74
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 75
MAN
P
7 11ALPHA-D-MANNOPYRANOSE
lig 76
MAN
P
8 11ALPHA-D-MANNOPYRANOSE
lig 77
NAG
A
905 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
A
937 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
MRD
A
938 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 80
MPD
A
939 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 81
MPD
A
940 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 82
CTS
A
941 13CASTANOSPERMINE
lig 83
NAG
B
908 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
NAG
B
943 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 85
NAG
B
944 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
MRD
B
945 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 87
MRD
B
946 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 88
MRD
B
947 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 89
CTS
B
948 13CASTANOSPERMINE