Analysis of Ligand-Protein Contacts in PDB entry:
4KDP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 4KDP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
B
2001 41,2-ETHANEDIOL
lig 2
EDO
B
2002 41,2-ETHANEDIOL
lig 3
TRS
B
2003 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 4
EDO
E
201 41,2-ETHANEDIOL
lig 5
EDO
F
201 41,2-ETHANEDIOL
lig 6
TRS
F
202 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 7
EDO
H
101 41,2-ETHANEDIOL
lig 8
EDO
H
102 41,2-ETHANEDIOL
lig 9
TRS
H
103 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 10
TRS
J
101 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 11
TRS
J
102 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL