Analysis of Ligand-Protein Contacts in PDB entry:
4LRF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 19 ligands in PDB entry 4LRF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
85 11PHOSPHOTHREONINE
lig 2
TPO
B
85 11PHOSPHOTHREONINE
lig 3
TPO
C
85 11PHOSPHOTHREONINE
lig 4
MN
A
401 1MANGANESE (II) ION
lig 5
MN
A
402 1MANGANESE (II) ION
lig 6
MN
A
403 1MANGANESE (II) ION
lig 7
MN
A
404 1MANGANESE (II) ION
lig 8
GOL
A
405 6GLYCEROL
lig 9
HSX
A
406 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 10
HSX
A
407 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 11
MN
B
401 1MANGANESE (II) ION
lig 12
MN
B
402 1MANGANESE (II) ION
lig 13
MN
B
403 1MANGANESE (II) ION
lig 14
MN
B
404 1MANGANESE (II) ION
lig 15
MN
B
405 1MANGANESE (II) ION
lig 16
GOL
B
406 6GLYCEROL
lig 17
MN
C
401 1MANGANESE (II) ION
lig 18
MN
C
402 1MANGANESE (II) ION
lig 19
MN
C
403 1MANGANESE (II) ION