Analysis of Ligand-Protein Contacts in PDB entry:
4NM3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 10 ligands in PDB entry 4NM3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
9 10PHOSPHOSERINE
lig 2
GOL
A
401 6GLYCEROL
lig 3
GOL
A
402 6GLYCEROL
lig 4
GOL
A
403 6GLYCEROL
lig 5
GOL
A
404 6GLYCEROL
lig 6
MG
A
405 1MAGNESIUM ION
lig 7
MG
A
406 1MAGNESIUM ION
lig 8
CL
A
407 1CHLORIDE ION
lig 9
DTT
A
408 82,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 10
ADP
A
409 27ADENOSINE-5'-DIPHOSPHATE