Analysis of Ligand-Protein Contacts in PDB entry:
4NTR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 75 ligands in PDB entry 4NTR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ORN
A
1 8L-ORNITHINE
lig 2
ORN
A
9 8L-ORNITHINE
lig 3
SAR
A
13 5SARCOSINE
lig 4
ORN
A
15 8L-ORNITHINE
lig 5
ORN
B
1 8L-ORNITHINE
lig 6
ORN
B
9 8L-ORNITHINE
lig 7
SAR
B
13 5SARCOSINE
lig 8
ORN
B
15 8L-ORNITHINE
lig 9
ORN
C
1 8L-ORNITHINE
lig 10
ORN
C
9 8L-ORNITHINE
lig 11
SAR
C
13 5SARCOSINE
lig 12
ORN
C
15 8L-ORNITHINE
lig 13
ORN
D
1 8L-ORNITHINE
lig 14
ORN
D
9 8L-ORNITHINE
lig 15
SAR
D
13 5SARCOSINE
lig 16
ORN
D
15 8L-ORNITHINE
lig 17
ORN
E
1 8L-ORNITHINE
lig 18
ORN
E
9 8L-ORNITHINE
lig 19
SAR
E
13 5SARCOSINE
lig 20
ORN
E
15 8L-ORNITHINE
lig 21
ORN
F
1 8L-ORNITHINE
lig 22
ORN
F
9 8L-ORNITHINE
lig 23
SAR
F
13 5SARCOSINE
lig 24
ORN
F
15 8L-ORNITHINE
lig 25
ORN
G
1 8L-ORNITHINE
lig 26
ORN
G
9 8L-ORNITHINE
lig 27
SAR
G
13 5SARCOSINE
lig 28
ORN
G
15 8L-ORNITHINE
lig 29
ORN
H
1 8L-ORNITHINE
lig 30
ORN
H
9 8L-ORNITHINE
lig 31
SAR
H
13 5SARCOSINE
lig 32
ORN
H
15 8L-ORNITHINE
lig 33
ORN
I
1 8L-ORNITHINE
lig 34
ORN
I
9 8L-ORNITHINE
lig 35
SAR
I
13 5SARCOSINE
lig 36
ORN
I
15 8L-ORNITHINE
lig 37
ORN
J
1 8L-ORNITHINE
lig 38
ORN
J
9 8L-ORNITHINE
lig 39
SAR
J
13 5SARCOSINE
lig 40
ORN
J
15 8L-ORNITHINE
lig 41
ORN
K
1 8L-ORNITHINE
lig 42
ORN
K
9 8L-ORNITHINE
lig 43
SAR
K
13 5SARCOSINE
lig 44
ORN
K
15 8L-ORNITHINE
lig 45
ORN
L
1 8L-ORNITHINE
lig 46
ORN
L
9 8L-ORNITHINE
lig 47
SAR
L
13 5SARCOSINE
lig 48
ORN
L
15 8L-ORNITHINE
lig 49
ORN
M
1 8L-ORNITHINE
lig 50
ORN
M
9 8L-ORNITHINE
lig 51
SAR
M
13 5SARCOSINE
lig 52
ORN
M
15 8L-ORNITHINE
lig 53
ORN
N
1 8L-ORNITHINE
lig 54
ORN
N
9 8L-ORNITHINE
lig 55
SAR
N
13 5SARCOSINE
lig 56
ORN
N
15 8L-ORNITHINE
lig 57
ORN
O
1 8L-ORNITHINE
lig 58
ORN
O
9 8L-ORNITHINE
lig 59
SAR
O
13 5SARCOSINE
lig 60
ORN
O
15 8L-ORNITHINE
lig 61
ORN
P
1 8L-ORNITHINE
lig 62
ORN
P
9 8L-ORNITHINE
lig 63
SAR
P
13 5SARCOSINE
lig 64
ORN
P
15 8L-ORNITHINE
lig 65
CL
A
101 1CHLORIDE ION
lig 66
NA
A
102 1SODIUM ION
lig 67
NA
B
101 1SODIUM ION
lig 68
CL
C
101 1CHLORIDE ION
lig 69
CL
C
102 1CHLORIDE ION
lig 70
CL
D
101 1CHLORIDE ION
lig 71
CL
E
101 1CHLORIDE ION
lig 72
CL
G
101 1CHLORIDE ION
lig 73
CL
H
101 1CHLORIDE ION
lig 74
CL
J
101 1CHLORIDE ION
lig 75
NA
M
101 1SODIUM ION