Analysis of Ligand-Protein Contacts in PDB entry:
4RVY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 166 ligands in PDB entry 4RVY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OEX
A
601 10CA-MN4-O5 CLUSTER
lig 2
FE2
A
602 1FE (II) ION
lig 3
CLA
A
603 65CHLOROPHYLL A
lig 4
CLA
A
604 65CHLOROPHYLL A
lig 5
PHO
A
605 64PHEOPHYTIN A
lig 6
PHO
A
606 64PHEOPHYTIN A
lig 7
CLA
A
607 65CHLOROPHYLL A
lig 8
BCR
A
608 40BETA-CAROTENE
lig 9
SQD
A
609 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 10
CL
A
610 1CHLORIDE ION
lig 11
CL
A
611 1CHLORIDE ION
lig 12
BCT
A
612 4BICARBONATE ION
lig 13
PL9
A
613 55 BENZOQUINONE
lig 14
LMG
A
614 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 15
OEX
a
601 10CA-MN4-O5 CLUSTER
lig 16
FE2
a
602 1FE (II) ION
lig 17
CLA
a
603 65CHLOROPHYLL A
lig 18
CLA
a
604 65CHLOROPHYLL A
lig 19
PHO
a
605 64PHEOPHYTIN A
lig 20
PHO
a
606 64PHEOPHYTIN A
lig 21
CLA
a
607 65CHLOROPHYLL A
lig 22
BCR
a
608 40BETA-CAROTENE
lig 23
SQD
a
609 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 24
CL
a
610 1CHLORIDE ION
lig 25
CL
a
611 1CHLORIDE ION
lig 26
BCT
a
612 4BICARBONATE ION
lig 27
PL9
a
613 55 BENZOQUINONE
lig 28
LMG
a
614 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 29
SQD
B
601 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 30
CLA
B
602 65CHLOROPHYLL A
lig 31
CLA
B
603 65CHLOROPHYLL A
lig 32
CLA
B
604 65CHLOROPHYLL A
lig 33
CLA
B
605 65CHLOROPHYLL A
lig 34
CLA
B
606 65CHLOROPHYLL A
lig 35
CLA
B
607 65CHLOROPHYLL A
lig 36
CLA
B
608 65CHLOROPHYLL A
lig 37
CLA
B
609 65CHLOROPHYLL A
lig 38
CLA
B
610 65CHLOROPHYLL A
lig 39
CLA
B
611 65CHLOROPHYLL A
lig 40
CLA
B
612 65CHLOROPHYLL A
lig 41
CLA
B
613 65CHLOROPHYLL A
lig 42
CLA
B
614 65CHLOROPHYLL A
lig 43
CLA
B
615 65CHLOROPHYLL A
lig 44
CLA
B
616 65CHLOROPHYLL A
lig 45
CLA
B
617 65CHLOROPHYLL A
lig 46
BCR
B
618 40BETA-CAROTENE
lig 47
BCR
B
619 40BETA-CAROTENE
lig 48
LMG
B
620 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 49
CA
B
621 1CALCIUM ION
lig 50
BCR
B
622 40BETA-CAROTENE
lig 51
SQD
b
601 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 52
CLA
b
602 65CHLOROPHYLL A
lig 53
CLA
b
603 65CHLOROPHYLL A
lig 54
CLA
b
604 65CHLOROPHYLL A
lig 55
CLA
b
605 65CHLOROPHYLL A
lig 56
CLA
b
606 65CHLOROPHYLL A
lig 57
CLA
b
607 65CHLOROPHYLL A
lig 58
CLA
b
608 65CHLOROPHYLL A
lig 59
CLA
b
609 65CHLOROPHYLL A
lig 60
CLA
b
610 65CHLOROPHYLL A
lig 61
CLA
b
611 65CHLOROPHYLL A
lig 62
CLA
b
612 65CHLOROPHYLL A
lig 63
CLA
b
613 65CHLOROPHYLL A
lig 64
CLA
b
614 65CHLOROPHYLL A
lig 65
CLA
b
615 65CHLOROPHYLL A
lig 66
CLA
b
616 65CHLOROPHYLL A
lig 67
CLA
b
617 65CHLOROPHYLL A
lig 68
BCR
b
618 40BETA-CAROTENE
lig 69
LMG
b
619 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 70
CA
b
620 1CALCIUM ION
lig 71
SQD
b
621 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 72
BCR
b
622 40BETA-CAROTENE
lig 73
CLA
C
501 65CHLOROPHYLL A
lig 74
CLA
C
502 65CHLOROPHYLL A
lig 75
CLA
C
503 65CHLOROPHYLL A
lig 76
CLA
C
504 65CHLOROPHYLL A
lig 77
CLA
C
505 65CHLOROPHYLL A
lig 78
CLA
C
506 65CHLOROPHYLL A
lig 79
CLA
C
507 65CHLOROPHYLL A
lig 80
CLA
C
508 65CHLOROPHYLL A
lig 81
CLA
C
509 65CHLOROPHYLL A
lig 82
CLA
C
510 65CHLOROPHYLL A
lig 83
CLA
C
511 65CHLOROPHYLL A
lig 84
CLA
C
512 65CHLOROPHYLL A
lig 85
CLA
C
513 65CHLOROPHYLL A
lig 86
BCR
C
514 40BETA-CAROTENE
lig 87
BCR
C
515 40BETA-CAROTENE
lig 88
DGD
C
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 89
DGD
C
517 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 90
DGD
C
518 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 91
LMG
C
519 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 92
LMG
C
520 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 93
CLA
c
501 65CHLOROPHYLL A
lig 94
CLA
c
502 65CHLOROPHYLL A
lig 95
CLA
c
503 65CHLOROPHYLL A
lig 96
CLA
c
504 65CHLOROPHYLL A
lig 97
CLA
c
505 65CHLOROPHYLL A
lig 98
CLA
c
506 65CHLOROPHYLL A
lig 99
CLA
c
507 65CHLOROPHYLL A
lig 100
CLA
c
508 65CHLOROPHYLL A
lig 101
CLA
c
509 65CHLOROPHYLL A
lig 102
CLA
c
510 65CHLOROPHYLL A
lig 103
CLA
c
511 65CHLOROPHYLL A
lig 104
CLA
c
512 65CHLOROPHYLL A
lig 105
CLA
c
513 65CHLOROPHYLL A
lig 106
BCR
c
514 40BETA-CAROTENE
lig 107
BCR
c
515 40BETA-CAROTENE
lig 108
DGD
c
516 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 109
DGD
c
517 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 110
DGD
c
518 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 111
LMG
c
519 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 112
LMG
c
520 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 113
CLA
D
401 65CHLOROPHYLL A
lig 114
CLA
D
402 65CHLOROPHYLL A
lig 115
CLA
D
403 65CHLOROPHYLL A
lig 116
BCR
D
404 40BETA-CAROTENE
lig 117
LHG
D
405 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 118
LMG
D
406 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 119
LHG
D
407 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 120
PL9
D
408 55 BENZOQUINONE
lig 121
LHG
D
409 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 122
DGD
D
410 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 123
SQD
D
411 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 124
CLA
d
401 65CHLOROPHYLL A
lig 125
CLA
d
402 65CHLOROPHYLL A
lig 126
CLA
d
403 65CHLOROPHYLL A
lig 127
BCR
d
404 40BETA-CAROTENE
lig 128
LHG
d
405 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 129
LMG
d
406 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 130
LHG
d
407 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 131
PL9
d
408 55 BENZOQUINONE
lig 132
LHG
d
409 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 133
DGD
d
410 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 134
SQD
d
411 43 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 135
LHG
E
101 421,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 136
LHG
e
101 421,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 137
HEM
F
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 138
CA
F
102 1CALCIUM ION
lig 139
HEM
f
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 140
CA
f
102 1CALCIUM ION
lig 141
BCR
H
101 40BETA-CAROTENE
lig 142
DGD
H
102 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 143
BCR
h
101 40BETA-CAROTENE
lig 144
DGD
h
102 62DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 145
MG
J
101 1MAGNESIUM ION
lig 146
MG
j
101 1MAGNESIUM ION
lig 147
BCR
K
101 40BETA-CAROTENE
lig 148
BCR
K
102 40BETA-CAROTENE
lig 149
BCR
k
101 40BETA-CAROTENE
lig 150
BCR
k
102 40BETA-CAROTENE
lig 151
SQD
L
101 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 152
LHG
L
102 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 153
SQD
l
101 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 154
SQD
l
102 54 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 155
LHG
l
103 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 156
CA
O
301 1CALCIUM ION
lig 157
CA
o
301 1CALCIUM ION
lig 158
BCR
T
101 40BETA-CAROTENE
lig 159
BCR
T
102 40BETA-CAROTENE
lig 160
BCR
t
101 40BETA-CAROTENE
lig 161
CL
U
201 1CHLORIDE ION
lig 162
CL
u
201 1CHLORIDE ION
lig 163
HEM
V
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 164
HEM
v
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 165
LMG
Z
101 371,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 166
LMG
z
101 371,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE