Analysis of Ligand-Protein Contacts in PDB entry:
4YD1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 4YD1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
601 1MAGNESIUM ION
lig 2
MG
A
602 1MAGNESIUM ION
lig 3
EDO
A
603 41,2-ETHANEDIOL
lig 4
GOL
A
604 6GLYCEROL
lig 5
GOL
A
605 6GLYCEROL
lig 6
EDO
A
606 41,2-ETHANEDIOL
lig 7
DUP
A
607 282'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHO
lig 8
CL
A
608 1CHLORIDE ION
lig 9
CL
A
609 1CHLORIDE ION
lig 10
CL
A
610 1CHLORIDE ION
lig 11
CL
A
611 1CHLORIDE ION
lig 12
NA
A
612 1SODIUM ION
lig 13
MG
T
101 1MAGNESIUM ION