Analysis of Ligand-Protein Contacts in PDB entry:
4YM1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 4YM1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
E
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 3
FUC
E
3 10ALPHA-L-FUCOPYRANOSE
lig 4
BGC
F
1 12BETA-D-GLUCOPYRANOSE
lig 5
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 6
FUC
F
3 10ALPHA-L-FUCOPYRANOSE
lig 7
SO4
A
403 5SULFATE ION
lig 8
SO4
A
404 5SULFATE ION
lig 9
SO4
C
401 5SULFATE ION