Analysis of Ligand-Protein Contacts in PDB entry:
4YTS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 4YTS. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MN
A
401 1MANGANESE (II) ION
lig 2
TGS
A
402 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 3
TGS
A
403 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 4
TGR
A
404 111-DEOXY-ALPHA-D-XYLO-HEX-3-ULOFURANOSE
lig 5
TGS
A
405 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 6
TGS
B
401 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 7
MN
B
402 1MANGANESE (II) ION
lig 8
TGS
B
403 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 9
TGR
B
404 111-DEOXY-ALPHA-D-XYLO-HEX-3-ULOFURANOSE
lig 10
MN
C
401 1MANGANESE (II) ION
lig 11
TGS
C
402 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 12
TGS
C
403 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 13
TGS
D
401 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 14
MN
D
402 1MANGANESE (II) ION
lig 15
TGS
D
403 111-DEOXY-D-XYLO-HEX-3-ULOSE
lig 16
TGR
D
404 111-DEOXY-ALPHA-D-XYLO-HEX-3-ULOFURANOSE