Analysis of Ligand-Protein Contacts in PDB entry:
4YV9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 49 ligands in PDB entry 4YV9. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DAL
E
1 5D-ALANINE
lig 2
MLE
E
2 9N-METHYLLEUCINE
lig 3
MLE
E
3 9N-METHYLLEUCINE
lig 4
MVA
E
4 8N-METHYLVALINE
lig 5
BMT
E
5 134-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THRE
lig 6
ABA
E
6 6ALPHA-AMINOBUTYRIC ACID
lig 7
SAR
E
7 5SARCOSINE
lig 8
MLE
E
8 9N-METHYLLEUCINE
lig 9
MLE
E
10 9N-METHYLLEUCINE
lig 10
DAL
F
1 5D-ALANINE
lig 11
MLE
F
2 9N-METHYLLEUCINE
lig 12
MLE
F
3 9N-METHYLLEUCINE
lig 13
MVA
F
4 8N-METHYLVALINE
lig 14
BMT
F
5 134-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THRE
lig 15
ABA
F
6 6ALPHA-AMINOBUTYRIC ACID
lig 16
SAR
F
7 5SARCOSINE
lig 17
MLE
F
8 9N-METHYLLEUCINE
lig 18
MLE
F
10 9N-METHYLLEUCINE
lig 19
DAL
G
1 5D-ALANINE
lig 20
MLE
G
2 9N-METHYLLEUCINE
lig 21
MLE
G
3 9N-METHYLLEUCINE
lig 22
MVA
G
4 8N-METHYLVALINE
lig 23
BMT
G
5 134-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THRE
lig 24
ABA
G
6 6ALPHA-AMINOBUTYRIC ACID
lig 25
SAR
G
7 5SARCOSINE
lig 26
MLE
G
8 9N-METHYLLEUCINE
lig 27
MLE
G
10 9N-METHYLLEUCINE
lig 28
DAL
H
1 5D-ALANINE
lig 29
MLE
H
2 9N-METHYLLEUCINE
lig 30
MLE
H
3 9N-METHYLLEUCINE
lig 31
MVA
H
4 8N-METHYLVALINE
lig 32
BMT
H
5 134-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THRE
lig 33
ABA
H
6 6ALPHA-AMINOBUTYRIC ACID
lig 34
SAR
H
7 5SARCOSINE
lig 35
MLE
H
8 9N-METHYLLEUCINE
lig 36
MLE
H
10 9N-METHYLLEUCINE
lig 37
SO4
A
301 5SULFATE ION
lig 38
SO4
A
302 5SULFATE ION
lig 39
SO4
A
303 5SULFATE ION
lig 40
SO4
A
304 5SULFATE ION
lig 41
SO4
B
301 5SULFATE ION
lig 42
SO4
B
302 5SULFATE ION
lig 43
SO4
C
301 5SULFATE ION
lig 44
SO4
C
302 5SULFATE ION
lig 45
SO4
C
303 5SULFATE ION
lig 46
SO4
D
301 5SULFATE ION
lig 47
SO4
D
302 5SULFATE ION
lig 48
SO4
D
303 5SULFATE ION
lig 49
SO4
D
304 5SULFATE ION