Analysis of Ligand-Protein Contacts in PDB entry:
4AQD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 75 ligands in PDB entry 4AQD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUL
D
3 10BETA-L-FUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUL
F
3 10BETA-L-FUCOPYRANOSE
lig 11
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
MAN
G
3 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
FUL
H
3 10BETA-L-FUCOPYRANOSE
lig 17
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
FUL
I
3 10BETA-L-FUCOPYRANOSE
lig 20
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
FUL
J
3 10BETA-L-FUCOPYRANOSE
lig 23
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
FUL
K
3 10BETA-L-FUCOPYRANOSE
lig 26
BAL
A
550 6BETA-ALANINE
lig 27
NAG
A
651 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
PG4
A
1530 13TETRAETHYLENE GLYCOL
lig 29
PG4
A
1531 13TETRAETHYLENE GLYCOL
lig 30
EDO
A
1532 41,2-ETHANEDIOL
lig 31
EDO
A
1533 41,2-ETHANEDIOL
lig 32
EDO
A
1534 41,2-ETHANEDIOL
lig 33
EDO
A
1535 41,2-ETHANEDIOL
lig 34
EDO
A
1536 41,2-ETHANEDIOL
lig 35
EDO
A
1537 41,2-ETHANEDIOL
lig 36
EDO
A
1538 41,2-ETHANEDIOL
lig 37
EDO
A
1539 41,2-ETHANEDIOL
lig 38
EDO
A
1540 41,2-ETHANEDIOL
lig 39
UNX
A
1541 1UNKNOWN ATOM OR ION
lig 40
UNX
A
1542 1UNKNOWN ATOM OR ION
lig 41
UNX
A
1543 1UNKNOWN ATOM OR ION
lig 42
UNX
A
1544 1UNKNOWN ATOM OR ION
lig 43
CL
A
1545 1CHLORIDE ION
lig 44
CL
A
1546 1CHLORIDE ION
lig 45
CL
A
1547 1CHLORIDE ION
lig 46
UNX
A
1548 1UNKNOWN ATOM OR ION
lig 47
GLY
A
1643 5GLYCINE
lig 48
BAL
B
550 6BETA-ALANINE
lig 49
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
B
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
B
621 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
B
651 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
B
671 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
PEG
B
1530 7DI(HYDROXYETHYL)ETHER
lig 55
PEG
B
1531 7DI(HYDROXYETHYL)ETHER
lig 56
EDO
B
1532 41,2-ETHANEDIOL
lig 57
EDO
B
1533 41,2-ETHANEDIOL
lig 58
EDO
B
1534 41,2-ETHANEDIOL
lig 59
EDO
B
1535 41,2-ETHANEDIOL
lig 60
EDO
B
1536 41,2-ETHANEDIOL
lig 61
EDO
B
1537 41,2-ETHANEDIOL
lig 62
EDO
B
1538 41,2-ETHANEDIOL
lig 63
EDO
B
1539 41,2-ETHANEDIOL
lig 64
EDO
B
1540 41,2-ETHANEDIOL
lig 65
EDO
B
1541 41,2-ETHANEDIOL
lig 66
UNX
B
1542 1UNKNOWN ATOM OR ION
lig 67
UNX
B
1543 1UNKNOWN ATOM OR ION
lig 68
UNX
B
1544 1UNKNOWN ATOM OR ION
lig 69
UNX
B
1545 1UNKNOWN ATOM OR ION
lig 70
CL
B
1546 1CHLORIDE ION
lig 71
CL
B
1547 1CHLORIDE ION
lig 72
UNX
B
1548 1UNKNOWN ATOM OR ION
lig 73
CL
B
1549 1CHLORIDE ION
lig 74
CL
B
1550 1CHLORIDE ION
lig 75
GLY
B
1642 5GLYCINE