Analysis of Ligand-Protein Contacts in PDB entry:
4AVK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 4AVK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FVQ
A
201 213-(PYRIDIN-3-YL)PROP-2-YN-1-YL ALPHA-D-MAN
lig 2
NI
A
1159 1NICKEL (II) ION
lig 3
FVQ
B
201 213-(PYRIDIN-3-YL)PROP-2-YN-1-YL ALPHA-D-MAN
lig 4
SO4
B
1159 5SULFATE ION
lig 5
SO4
B
1160 5SULFATE ION
lig 6
SO4
B
1161 5SULFATE ION
lig 7
NI
B
1162 1NICKEL (II) ION
lig 8
SO4
B
1163 5SULFATE ION