Analysis of Ligand-Protein Contacts in PDB entry:
4BDV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 4BDV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 6
BMA
D
4 11BETA-D-MANNOPYRANOSE
lig 7
BMA
D
5 11BETA-D-MANNOPYRANOSE
lig 8
ZN
A
800 1ZINC ION
lig 9
CA
A
801 1CALCIUM ION
lig 10
EDO
A
3333 41,2-ETHANEDIOL
lig 11
CU1
B
1 1COPPER (I) ION
lig 12
EDO
B
3333 41,2-ETHANEDIOL