Analysis of Ligand-Protein Contacts in PDB entry:
4D1O


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 4D1O. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ARG
A
700 12ARGININE
lig 2
HEM
A
500 43PROTOPORPHYRIN IX CONTAINING FE
lig 3
ACT
A
860 4ACETATE ION
lig 4
BTB
A
870 14 PROPANE-1,3-DIOL
lig 5
BTB
A
871 14 PROPANE-1,3-DIOL
lig 6
GOL
A
880 6GLYCEROL
lig 7
GOL
A
881 6GLYCEROL
lig 8
ZN
A
900 1ZINC ION
lig 9
H4B
A
1481 175,6,7,8-TETRAHYDROBIOPTERIN
lig 10
ARG
B
700 12ARGININE
lig 11
HEM
B
500 43PROTOPORPHYRIN IX CONTAINING FE
lig 12
ACT
B
860 4ACETATE ION
lig 13
BTB
B
870 14 PROPANE-1,3-DIOL
lig 14
BTB
B
871 14 PROPANE-1,3-DIOL
lig 15
GOL
B
880 6GLYCEROL
lig 16
H4B
B
1481 175,6,7,8-TETRAHYDROBIOPTERIN