Analysis of Ligand-Protein Contacts in PDB entry:
4D5P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 4D5P. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
XYP
B
1 10BETA-D-XYLOPYRANOSE
lig 3
XYP
B
2 9BETA-D-XYLOPYRANOSE
lig 4
XYP
B
3 9BETA-D-XYLOPYRANOSE
lig 5
XYP
B
4 9BETA-D-XYLOPYRANOSE
lig 6
CO
A
435 1COBALT (II) ION
lig 7
CO
A
436 1COBALT (II) ION
lig 8
NAG
A
437 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE