Analysis of Ligand-Protein Contacts in PDB entry:
4DD8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 4DD8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BAT
A
1000 32 METHYLAMIDE
lig 2
CA
A
1001 1CALCIUM ION
lig 3
ZN
A
1002 1ZINC ION
lig 4
NA
A
1003 1SODIUM ION
lig 5
CL
A
1004 1CHLORIDE ION
lig 6
NA
A
1005 1SODIUM ION
lig 7
K
A
1006 1POTASSIUM ION
lig 8
K
A
1007 1POTASSIUM ION
lig 9
BAT
B
1000 32 METHYLAMIDE
lig 10
CA
B
1001 1CALCIUM ION
lig 11
ZN
B
1002 1ZINC ION
lig 12
NA
B
1003 1SODIUM ION
lig 13
CL
B
1004 1CHLORIDE ION
lig 14
NA
B
1005 1SODIUM ION
lig 15
BAT
C
1000 32 METHYLAMIDE
lig 16
CA
C
1001 1CALCIUM ION
lig 17
ZN
C
1002 1ZINC ION
lig 18
NA
C
1003 1SODIUM ION
lig 19
CL
C
1004 1CHLORIDE ION
lig 20
NA
C
1005 1SODIUM ION
lig 21
BAT
D
1000 32 METHYLAMIDE
lig 22
CA
D
1001 1CALCIUM ION
lig 23
ZN
D
1002 1ZINC ION
lig 24
NA
D
1003 1SODIUM ION
lig 25
CL
D
1004 1CHLORIDE ION
lig 26
NA
D
1005 1SODIUM ION