Analysis of Ligand-Protein Contacts in PDB entry:
4DMB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 4DMB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NO3
A
301 4NITRATE ION
lig 2
MG
A
306 1MAGNESIUM ION
lig 3
NO3
A
302 4NITRATE ION
lig 4
MG
A
307 1MAGNESIUM ION
lig 5
GOL
A
303 6GLYCEROL
lig 6
PO4
A
304 5PHOSPHATE ION
lig 7
PEG
A
305 7DI(HYDROXYETHYL)ETHER
lig 8
NO3
B
301 4NITRATE ION
lig 9
PO4
B
302 5PHOSPHATE ION
lig 10
PEG
B
303 7DI(HYDROXYETHYL)ETHER
lig 11
UNL
B
304 4UNKNOWN LIGAND
lig 12
MG
B
305 1MAGNESIUM ION
lig 13
MG
B
306 1MAGNESIUM ION