Analysis of Ligand-Protein Contacts in PDB entry:
4DO4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 4DO4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
FUC
E
3 10ALPHA-L-FUCOPYRANOSE
lig 12
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
A
509 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
DJN
A
510 14 PIPERIDIN-3-YL]ACETAMIDE
lig 19
CIT
A
511 13CITRIC ACID
lig 20
GOL
A
512 6GLYCEROL
lig 21
GOL
A
513 6GLYCEROL
lig 22
GOL
A
514 6GLYCEROL
lig 23
ACY
A
515 4ACETIC ACID
lig 24
GOL
A
516 6GLYCEROL
lig 25
GOL
A
517 6GLYCEROL
lig 26
GOL
A
518 6GLYCEROL
lig 27
NAG
B
509 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
DJN
B
510 14 PIPERIDIN-3-YL]ACETAMIDE
lig 29
CIT
B
511 13CITRIC ACID
lig 30
GOL
B
512 6GLYCEROL
lig 31
GOL
B
513 6GLYCEROL
lig 32
GOL
B
514 6GLYCEROL
lig 33
GOL
B
515 6GLYCEROL
lig 34
GOL
B
516 6GLYCEROL
lig 35
GOL
B
517 6GLYCEROL
lig 36
GOL
B
518 6GLYCEROL