Analysis of Ligand-Protein Contacts in PDB entry:
4DO5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 4DO5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
A
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
DGJ
A
509 11(2R,3S,4R,5S)-2-(HYDROXYMETHYL)PIPERIDINE-
lig 17
CIT
A
510 13CITRIC ACID
lig 18
GOL
A
511 6GLYCEROL
lig 19
GOL
A
512 6GLYCEROL
lig 20
GOL
A
513 6GLYCEROL
lig 21
GOL
A
514 6GLYCEROL
lig 22
GOL
A
515 6GLYCEROL
lig 23
GOL
A
516 6GLYCEROL
lig 24
GOL
A
517 6GLYCEROL
lig 25
GOL
A
518 6GLYCEROL
lig 26
NAG
B
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
DGJ
B
509 11(2R,3S,4R,5S)-2-(HYDROXYMETHYL)PIPERIDINE-
lig 28
CIT
B
510 13CITRIC ACID
lig 29
GOL
B
511 6GLYCEROL
lig 30
GOL
B
512 6GLYCEROL
lig 31
GOL
B
513 6GLYCEROL
lig 32
GOL
B
514 6GLYCEROL
lig 33
GOL
B
515 6GLYCEROL
lig 34
GOL
B
516 6GLYCEROL