Analysis of Ligand-Protein Contacts in PDB entry:
4DPW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 4DPW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
AGS
A
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 2
DP6
A
402 18 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID
lig 3
FMT
A
403 3FORMIC ACID
lig 4
AGS
B
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 5
DP6
B
402 18 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID
lig 6
AGS
C
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 7
DP6
C
402 18 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID
lig 8
AGS
D
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 9
DP6
D
402 18 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID
lig 10
FMT
D
403 3FORMIC ACID
lig 11
AGS
E
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 12
DP6
E
402 18 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID
lig 13
GOL
E
403 6GLYCEROL
lig 14
FMT
E
404 3FORMIC ACID
lig 15
AGS
F
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 16
DP6
F
402 18 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID
lig 17
AGS
G
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 18
DP6
G
402 18 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID
lig 19
AGS
H
401 31PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
lig 20
DP6
H
402 18 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID
lig 21
FMT
H
403 3FORMIC ACID