Analysis of Ligand-Protein Contacts in PDB entry:
4DUW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 111 ligands in PDB entry 4DUW. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
E
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 3
BGC
F
1 12BETA-D-GLUCOPYRANOSE
lig 4
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 5
BGC
G
1 12BETA-D-GLUCOPYRANOSE
lig 6
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 7
BGC
H
1 12BETA-D-GLUCOPYRANOSE
lig 8
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 9
MG
A
3001 1MAGNESIUM ION
lig 10
MG
A
3002 1MAGNESIUM ION
lig 11
MG
A
3006 1MAGNESIUM ION
lig 12
NA
A
3101 1SODIUM ION
lig 13
NA
A
3102 1SODIUM ION
lig 14
NA
A
3103 1SODIUM ION
lig 15
NA
A
3104 1SODIUM ION
lig 16
DMS
A
8001 4DIMETHYL SULFOXIDE
lig 17
DMS
A
8002 4DIMETHYL SULFOXIDE
lig 18
DMS
A
8003 4DIMETHYL SULFOXIDE
lig 19
DMS
A
8004 4DIMETHYL SULFOXIDE
lig 20
DMS
A
8005 4DIMETHYL SULFOXIDE
lig 21
DMS
A
8006 4DIMETHYL SULFOXIDE
lig 22
DMS
A
8007 4DIMETHYL SULFOXIDE
lig 23
DMS
A
8008 4DIMETHYL SULFOXIDE
lig 24
DMS
A
8009 4DIMETHYL SULFOXIDE
lig 25
DMS
A
8010 4DIMETHYL SULFOXIDE
lig 26
DMS
A
8011 4DIMETHYL SULFOXIDE
lig 27
DMS
A
8012 4DIMETHYL SULFOXIDE
lig 28
DMS
A
8013 4DIMETHYL SULFOXIDE
lig 29
DMS
A
8014 4DIMETHYL SULFOXIDE
lig 30
DMS
A
8015 4DIMETHYL SULFOXIDE
lig 31
DMS
A
8016 4DIMETHYL SULFOXIDE
lig 32
DMS
A
8017 4DIMETHYL SULFOXIDE
lig 33
DMS
A
8018 4DIMETHYL SULFOXIDE
lig 34
MG
B
3001 1MAGNESIUM ION
lig 35
MG
B
3002 1MAGNESIUM ION
lig 36
MG
B
3006 1MAGNESIUM ION
lig 37
NA
B
3101 1SODIUM ION
lig 38
NA
B
3102 1SODIUM ION
lig 39
NA
B
3103 1SODIUM ION
lig 40
NA
B
3104 1SODIUM ION
lig 41
DMS
B
8001 4DIMETHYL SULFOXIDE
lig 42
DMS
B
8002 4DIMETHYL SULFOXIDE
lig 43
DMS
B
8003 4DIMETHYL SULFOXIDE
lig 44
DMS
B
8004 4DIMETHYL SULFOXIDE
lig 45
DMS
B
8005 4DIMETHYL SULFOXIDE
lig 46
DMS
B
8006 4DIMETHYL SULFOXIDE
lig 47
DMS
B
8007 4DIMETHYL SULFOXIDE
lig 48
DMS
B
8008 4DIMETHYL SULFOXIDE
lig 49
DMS
B
8009 4DIMETHYL SULFOXIDE
lig 50
DMS
B
8010 4DIMETHYL SULFOXIDE
lig 51
DMS
B
8011 4DIMETHYL SULFOXIDE
lig 52
DMS
B
8012 4DIMETHYL SULFOXIDE
lig 53
DMS
B
8013 4DIMETHYL SULFOXIDE
lig 54
DMS
B
8014 4DIMETHYL SULFOXIDE
lig 55
DMS
B
8015 4DIMETHYL SULFOXIDE
lig 56
DMS
B
8016 4DIMETHYL SULFOXIDE
lig 57
DMS
B
8017 4DIMETHYL SULFOXIDE
lig 58
DMS
B
8018 4DIMETHYL SULFOXIDE
lig 59
DMS
B
8019 4DIMETHYL SULFOXIDE
lig 60
DMS
B
8020 4DIMETHYL SULFOXIDE
lig 61
DMS
B
8021 4DIMETHYL SULFOXIDE
lig 62
DMS
B
8022 4DIMETHYL SULFOXIDE
lig 63
DMS
B
8023 4DIMETHYL SULFOXIDE
lig 64
DMS
B
8024 4DIMETHYL SULFOXIDE
lig 65
MG
C
3001 1MAGNESIUM ION
lig 66
MG
C
3002 1MAGNESIUM ION
lig 67
NA
C
3101 1SODIUM ION
lig 68
NA
C
3102 1SODIUM ION
lig 69
NA
C
3103 1SODIUM ION
lig 70
NA
C
3104 1SODIUM ION
lig 71
DMS
C
8001 4DIMETHYL SULFOXIDE
lig 72
DMS
C
8002 4DIMETHYL SULFOXIDE
lig 73
DMS
C
8003 4DIMETHYL SULFOXIDE
lig 74
DMS
C
8004 4DIMETHYL SULFOXIDE
lig 75
DMS
C
8005 4DIMETHYL SULFOXIDE
lig 76
DMS
C
8006 4DIMETHYL SULFOXIDE
lig 77
DMS
C
8007 4DIMETHYL SULFOXIDE
lig 78
DMS
C
8008 4DIMETHYL SULFOXIDE
lig 79
DMS
C
8009 4DIMETHYL SULFOXIDE
lig 80
DMS
C
8010 4DIMETHYL SULFOXIDE
lig 81
DMS
C
8011 4DIMETHYL SULFOXIDE
lig 82
DMS
C
8012 4DIMETHYL SULFOXIDE
lig 83
DMS
C
8013 4DIMETHYL SULFOXIDE
lig 84
DMS
C
8014 4DIMETHYL SULFOXIDE
lig 85
DMS
C
8015 4DIMETHYL SULFOXIDE
lig 86
DMS
C
8016 4DIMETHYL SULFOXIDE
lig 87
DMS
C
8017 4DIMETHYL SULFOXIDE
lig 88
DMS
C
8018 4DIMETHYL SULFOXIDE
lig 89
DMS
C
8019 4DIMETHYL SULFOXIDE
lig 90
DMS
C
8020 4DIMETHYL SULFOXIDE
lig 91
MG
D
3001 1MAGNESIUM ION
lig 92
MG
D
3002 1MAGNESIUM ION
lig 93
NA
D
3101 1SODIUM ION
lig 94
NA
D
3102 1SODIUM ION
lig 95
NA
D
3103 1SODIUM ION
lig 96
NA
D
3104 1SODIUM ION
lig 97
DMS
D
8001 4DIMETHYL SULFOXIDE
lig 98
DMS
D
8002 4DIMETHYL SULFOXIDE
lig 99
DMS
D
8003 4DIMETHYL SULFOXIDE
lig 100
DMS
D
8004 4DIMETHYL SULFOXIDE
lig 101
DMS
D
8005 4DIMETHYL SULFOXIDE
lig 102
DMS
D
8006 4DIMETHYL SULFOXIDE
lig 103
DMS
D
8007 4DIMETHYL SULFOXIDE
lig 104
DMS
D
8008 4DIMETHYL SULFOXIDE
lig 105
DMS
D
8009 4DIMETHYL SULFOXIDE
lig 106
DMS
D
8010 4DIMETHYL SULFOXIDE
lig 107
DMS
D
8011 4DIMETHYL SULFOXIDE
lig 108
DMS
D
8012 4DIMETHYL SULFOXIDE
lig 109
DMS
D
8013 4DIMETHYL SULFOXIDE
lig 110
DMS
D
8014 4DIMETHYL SULFOXIDE
lig 111
DMS
D
8015 4DIMETHYL SULFOXIDE