Analysis of Ligand-Protein Contacts in PDB entry:
4DWS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 49 ligands in PDB entry 4DWS. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MLY
A
93 11N-DIMETHYL-LYSINE
lig 2
MLY
A
210 10N-DIMETHYL-LYSINE
lig 3
MLY
A
290 11N-DIMETHYL-LYSINE
lig 4
M3L
A
364 12N-TRIMETHYLLYSINE
lig 5
M3L
A
390 12N-TRIMETHYLLYSINE
lig 6
MLY
A
400 11N-DIMETHYL-LYSINE
lig 7
MLY
A
402 11N-DIMETHYL-LYSINE
lig 8
MLZ
A
405 10N-METHYL-LYSINE
lig 9
M3L
A
498 12N-TRIMETHYLLYSINE
lig 10
MLZ
A
518 10N-METHYL-LYSINE
lig 11
MLY
A
552 11N-DIMETHYL-LYSINE
lig 12
MLY
A
565 11N-DIMETHYL-LYSINE
lig 13
M3L
A
620 12N-TRIMETHYLLYSINE
lig 14
MLZ
A
625 10N-METHYL-LYSINE
lig 15
M3L
B
150 12N-TRIMETHYLLYSINE
lig 16
MLY
B
210 11N-DIMETHYL-LYSINE
lig 17
MLY
B
235 11N-DIMETHYL-LYSINE
lig 18
MLY
B
364 11N-DIMETHYL-LYSINE
lig 19
MLY
B
374 11N-DIMETHYL-LYSINE
lig 20
MLY
B
390 11N-DIMETHYL-LYSINE
lig 21
M3L
B
400 12N-TRIMETHYLLYSINE
lig 22
MLY
B
402 11N-DIMETHYL-LYSINE
lig 23
MLZ
B
405 10N-METHYL-LYSINE
lig 24
M3L
B
474 12N-TRIMETHYLLYSINE
lig 25
MLY
B
498 11N-DIMETHYL-LYSINE
lig 26
MLY
C
121 11N-DIMETHYL-LYSINE
lig 27
MLZ
C
150 10N-METHYL-LYSINE
lig 28
MLY
C
210 11N-DIMETHYL-LYSINE
lig 29
MLY
C
213 11N-DIMETHYL-LYSINE
lig 30
MLY
C
364 11N-DIMETHYL-LYSINE
lig 31
MLY
C
390 11N-DIMETHYL-LYSINE
lig 32
M3L
C
400 12N-TRIMETHYLLYSINE
lig 33
MLY
C
402 11N-DIMETHYL-LYSINE
lig 34
M3L
C
474 12N-TRIMETHYLLYSINE
lig 35
M3L
C
498 12N-TRIMETHYLLYSINE
lig 36
MLY
C
518 11N-DIMETHYL-LYSINE
lig 37
MLY
C
552 11N-DIMETHYL-LYSINE
lig 38
MLZ
C
620 10N-METHYL-LYSINE
lig 39
MLY
D
210 11N-DIMETHYL-LYSINE
lig 40
MLZ
D
235 10N-METHYL-LYSINE
lig 41
MLY
D
390 11N-DIMETHYL-LYSINE
lig 42
M3L
D
400 12N-TRIMETHYLLYSINE
lig 43
MLY
D
402 11N-DIMETHYL-LYSINE
lig 44
M3L
D
474 12N-TRIMETHYLLYSINE
lig 45
M3L
D
498 12N-TRIMETHYLLYSINE
lig 46
GOL
A
701 6GLYCEROL
lig 47
GOL
B
701 6GLYCEROL
lig 48
GOL
D
701 6GLYCEROL
lig 49
GOL
D
702 6GLYCEROL