Analysis of Ligand-Protein Contacts in PDB entry:
4FYR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 4FYR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
A
1005 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
1006 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
1009 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
A
1010 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
A
1011 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
1012 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
ZN
A
1013 1ZINC ION
lig 14
BES
A
1014 22 PENTANOIC ACID
lig 15
SO4
A
1015 5SULFATE ION
lig 16
SO4
A
1016 5SULFATE ION
lig 17
SO4
A
1017 5SULFATE ION
lig 18
SO4
A
1018 5SULFATE ION
lig 19
SO4
A
1019 5SULFATE ION
lig 20
SO4
A
1020 5SULFATE ION
lig 21
SO4
A
1021 5SULFATE ION
lig 22
SO4
A
1022 5SULFATE ION
lig 23
SO4
A
1023 5SULFATE ION
lig 24
SO4
A
1024 5SULFATE ION
lig 25
ACY
A
1025 4ACETIC ACID