Analysis of Ligand-Protein Contacts in PDB entry:
4GZT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 45 ligands in PDB entry 4GZT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
BMA
E
4 11BETA-D-MANNOPYRANOSE
lig 5
BMA
E
5 11BETA-D-MANNOPYRANOSE
lig 6
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 11
BMA
G
4 11BETA-D-MANNOPYRANOSE
lig 12
BMA
G
5 11BETA-D-MANNOPYRANOSE
lig 13
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 16
BMA
H
4 11BETA-D-MANNOPYRANOSE
lig 17
BMA
H
5 11BETA-D-MANNOPYRANOSE
lig 18
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
FUC
I
2 10ALPHA-L-FUCOPYRANOSE
lig 20
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 23
BMA
J
4 11BETA-D-MANNOPYRANOSE
lig 24
BMA
J
5 11BETA-D-MANNOPYRANOSE
lig 25
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
FUC
K
2 10ALPHA-L-FUCOPYRANOSE
lig 27
NAG
K
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
FUC
K
4 10ALPHA-L-FUCOPYRANOSE
lig 29
G39
A
501 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 30
NAG
A
509 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
A
510 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
CA
A
511 1CALCIUM ION
lig 33
CA
A
512 1CALCIUM ION
lig 34
G39
B
501 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 35
NAG
B
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
B
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
B
509 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
CA
B
510 1CALCIUM ION
lig 39
G39
C
501 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 40
NAG
C
509 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
CA
C
510 1CALCIUM ION
lig 42
G39
D
501 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 43
NAG
D
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
D
512 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
CA
D
513 1CALCIUM ION