Analysis of Ligand-Protein Contacts in PDB entry:
4GZX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 4GZX. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GAL
E
1 12BETA-D-GALACTOPYRANOSE
lig 2
SIA
E
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 8
GAL
G
1 12BETA-D-GALACTOPYRANOSE
lig 9
SIA
G
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 18
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
FUC
J
3 10ALPHA-L-FUCOPYRANOSE
lig 23
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 28
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
FUL
L
2 10BETA-L-FUCOPYRANOSE
lig 30
NAG
A
808 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
A
809 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
A
810 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
CA
A
811 1CALCIUM ION
lig 34
CA
A
812 1CALCIUM ION
lig 35
NAG
B
808 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
B
809 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
B
810 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
CA
B
811 1CALCIUM ION
lig 39
SIA
C
801 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 40
NAG
C
810 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
C
811 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
CA
C
812 1CALCIUM ION
lig 43
SIA
D
801 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 44
NAG
D
807 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
D
810 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
CA
D
811 1CALCIUM ION