Analysis of Ligand-Protein Contacts in PDB entry:
4IJM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 33 ligands in PDB entry 4IJM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
432 11PHOSPHOTHREONINE
lig 2
TPO
B
432 11PHOSPHOTHREONINE
lig 3
TPO
C
432 11PHOSPHOTHREONINE
lig 4
TPO
D
432 11PHOSPHOTHREONINE
lig 5
TPO
E
432 11PHOSPHOTHREONINE
lig 6
TPO
F
432 11PHOSPHOTHREONINE
lig 7
MG
A
801 1MAGNESIUM ION
lig 8
ATP
A
802 31ADENOSINE-5'-TRIPHOSPHATE
lig 9
ATP
A
803 31ADENOSINE-5'-TRIPHOSPHATE
lig 10
ATP
A
804 31ADENOSINE-5'-TRIPHOSPHATE
lig 11
MG
B
601 1MAGNESIUM ION
lig 12
ATP
B
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 13
ATP
B
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 14
PO4
B
604 5PHOSPHATE ION
lig 15
PO4
B
605 5PHOSPHATE ION
lig 16
MG
B
606 1MAGNESIUM ION
lig 17
MG
C
601 1MAGNESIUM ION
lig 18
ATP
C
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 19
ATP
C
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 20
PO4
C
604 5PHOSPHATE ION
lig 21
MG
D
601 1MAGNESIUM ION
lig 22
ATP
D
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 23
ATP
D
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 24
PO4
D
604 5PHOSPHATE ION
lig 25
MG
E
601 1MAGNESIUM ION
lig 26
ATP
E
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 27
ATP
E
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 28
PO4
E
604 5PHOSPHATE ION
lig 29
PO4
E
605 5PHOSPHATE ION
lig 30
MG
F
601 1MAGNESIUM ION
lig 31
ATP
F
602 31ADENOSINE-5'-TRIPHOSPHATE
lig 32
PO4
F
603 5PHOSPHATE ION
lig 33
PO4
F
604 5PHOSPHATE ION