Analysis of Ligand-Protein Contacts in PDB entry:
4J88


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 4J88. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CQ1
A
66 24 YL]ACETIC ACID
lig 2
CQ1
B
66 24 YL]ACETIC ACID
lig 3
SO4
A
301 5SULFATE ION
lig 4
SO4
A
303 5SULFATE ION
lig 5
SO4
A
302 5SULFATE ION
lig 6
SO4
A
304 5SULFATE ION
lig 7
EDO
A
310 41,2-ETHANEDIOL
lig 8
EDO
A
317 41,2-ETHANEDIOL
lig 9
EDO
A
305 41,2-ETHANEDIOL
lig 10
EDO
A
311 41,2-ETHANEDIOL
lig 11
EDO
A
318 41,2-ETHANEDIOL
lig 12
EDO
A
306 41,2-ETHANEDIOL
lig 13
EDO
A
312 41,2-ETHANEDIOL
lig 14
EDO
A
319 41,2-ETHANEDIOL
lig 15
EDO
A
307 41,2-ETHANEDIOL
lig 16
EDO
A
313 41,2-ETHANEDIOL
lig 17
EDO
A
320 41,2-ETHANEDIOL
lig 18
EDO
A
308 41,2-ETHANEDIOL
lig 19
EDO
A
314 41,2-ETHANEDIOL
lig 20
EDO
A
321 41,2-ETHANEDIOL
lig 21
EDO
A
309 41,2-ETHANEDIOL
lig 22
EDO
A
315 41,2-ETHANEDIOL
lig 23
EDO
A
322 41,2-ETHANEDIOL
lig 24
EDO
A
316 41,2-ETHANEDIOL
lig 25
EDO
A
323 41,2-ETHANEDIOL
lig 26
TRS
A
324 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 27
TRS
A
325 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 28
TRS
A
326 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 29
SO4
B
301 5SULFATE ION
lig 30
SO4
B
304 5SULFATE ION
lig 31
SO4
B
302 5SULFATE ION
lig 32
SO4
B
303 5SULFATE ION
lig 33
SO4
B
305 5SULFATE ION
lig 34
EDO
B
306 41,2-ETHANEDIOL
lig 35
EDO
B
307 41,2-ETHANEDIOL
lig 36
EDO
B
308 41,2-ETHANEDIOL
lig 37
EDO
B
309 41,2-ETHANEDIOL
lig 38
EDO
B
310 41,2-ETHANEDIOL