Analysis of Ligand-Protein Contacts in PDB entry:
4KGR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 4KGR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
B3A
A
24 6(3S)-3-AMINOBUTANOIC ACID
lig 2
B3K
A
28 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 3
B3K
A
31 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 4
B3X
A
35 9(3S)-3,5-DIAMINO-5-OXOPENTANOIC ACID
lig 5
NH2
A
57 1AMINO GROUP
lig 6
B3A
B
24 6(3S)-3-AMINOBUTANOIC ACID
lig 7
B3K
B
28 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 8
B3K
B
31 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 9
B3X
B
35 9(3S)-3,5-DIAMINO-5-OXOPENTANOIC ACID
lig 10
NH2
B
57 1AMINO GROUP
lig 11
B3A
C
24 6(3S)-3-AMINOBUTANOIC ACID
lig 12
B3K
C
28 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 13
B3K
C
31 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 14
B3X
C
35 9(3S)-3,5-DIAMINO-5-OXOPENTANOIC ACID
lig 15
NH2
C
57 1AMINO GROUP
lig 16
B3A
D
24 6(3S)-3-AMINOBUTANOIC ACID
lig 17
B3K
D
28 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 18
B3K
D
31 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 19
B3X
D
35 9(3S)-3,5-DIAMINO-5-OXOPENTANOIC ACID
lig 20
NH2
D
57 1AMINO GROUP
lig 21
B3A
E
24 6(3S)-3-AMINOBUTANOIC ACID
lig 22
B3K
E
28 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 23
B3K
E
31 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 24
B3X
E
35 9(3S)-3,5-DIAMINO-5-OXOPENTANOIC ACID
lig 25
NH2
E
57 1AMINO GROUP
lig 26
B3A
F
24 6(3S)-3-AMINOBUTANOIC ACID
lig 27
B3K
F
28 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 28
B3K
F
31 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 29
B3X
F
35 9(3S)-3,5-DIAMINO-5-OXOPENTANOIC ACID
lig 30
NH2
F
57 1AMINO GROUP
lig 31
B3A
G
24 6(3S)-3-AMINOBUTANOIC ACID
lig 32
B3K
G
28 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 33
B3K
G
31 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 34
B3X
G
35 9(3S)-3,5-DIAMINO-5-OXOPENTANOIC ACID
lig 35
NH2
G
57 1AMINO GROUP
lig 36
B3A
H
24 6(3S)-3-AMINOBUTANOIC ACID
lig 37
B3K
H
28 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 38
B3K
H
31 10(3S)-3,7-DIAMINOHEPTANOIC ACID
lig 39
B3X
H
35 9(3S)-3,5-DIAMINO-5-OXOPENTANOIC ACID
lig 40
NH2
H
57 1AMINO GROUP
lig 41
GOL
H
101 6GLYCEROL