Analysis of Ligand-Protein Contacts in PDB entry:
4LR8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 17 ligands in PDB entry 4LR8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
85 11PHOSPHOTHREONINE
lig 2
TPO
B
85 11PHOSPHOTHREONINE
lig 3
TPO
C
85 11PHOSPHOTHREONINE
lig 4
MN
A
401 1MANGANESE (II) ION
lig 5
MN
A
402 1MANGANESE (II) ION
lig 6
MN
A
403 1MANGANESE (II) ION
lig 7
TRS
A
404 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 8
ACT
A
405 4ACETATE ION
lig 9
HSX
A
406 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 10
HSX
A
407 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 11
MN
B
401 1MANGANESE (II) ION
lig 12
MN
B
402 1MANGANESE (II) ION
lig 13
MN
B
403 1MANGANESE (II) ION
lig 14
TRS
B
404 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 15
MN
C
401 1MANGANESE (II) ION
lig 16
MN
C
402 1MANGANESE (II) ION
lig 17
MN
C
403 1MANGANESE (II) ION