Analysis of Ligand-Protein Contacts in PDB entry:
4NGP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 4NGP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 8
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 13
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
806 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
J31
A
817 42 BENZOYL]AMINO}PENTYL]CARBAMOYL}-L-GLUTAMI
lig 18
ZN
A
818 1ZINC ION
lig 19
ZN
A
819 1ZINC ION
lig 20
CL
A
820 1CHLORIDE ION
lig 21
CA
A
821 1CALCIUM ION