Analysis of Ligand-Protein Contacts in PDB entry:
4NI3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 4NI3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
A
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
GOL
A
615 6GLYCEROL
lig 16
GOL
A
616 6GLYCEROL
lig 17
TRS
A
617 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 18
TRS
A
618 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 19
GOL
A
619 6GLYCEROL
lig 20
NA
A
620 1SODIUM ION
lig 21
GOL
A
621 6GLYCEROL
lig 22
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
GOL
B
602 6GLYCEROL
lig 24
GOL
B
603 6GLYCEROL
lig 25
TRS
B
604 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 26
TRS
B
605 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 27
TRS
B
606 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 28
GOL
B
607 6GLYCEROL
lig 29
NA
B
608 1SODIUM ION
lig 30
NA
B
609 1SODIUM ION
lig 31
GOL
B
610 6GLYCEROL