Analysis of Ligand-Protein Contacts in PDB entry:
4NTP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 87 ligands in PDB entry 4NTP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ORN
A
1 8L-ORNITHINE
lig 2
PHI
A
4 12IODO-PHENYLALANINE
lig 3
ORN
A
9 8L-ORNITHINE
lig 4
SAR
A
13 5SARCOSINE
lig 5
ORN
A
15 8L-ORNITHINE
lig 6
ORN
B
1 8L-ORNITHINE
lig 7
PHI
B
4 12IODO-PHENYLALANINE
lig 8
ORN
B
9 8L-ORNITHINE
lig 9
SAR
B
13 5SARCOSINE
lig 10
ORN
B
15 8L-ORNITHINE
lig 11
ORN
C
1 8L-ORNITHINE
lig 12
PHI
C
4 12IODO-PHENYLALANINE
lig 13
ORN
C
9 8L-ORNITHINE
lig 14
SAR
C
13 5SARCOSINE
lig 15
ORN
C
15 8L-ORNITHINE
lig 16
ORN
D
1 8L-ORNITHINE
lig 17
PHI
D
4 12IODO-PHENYLALANINE
lig 18
ORN
D
9 8L-ORNITHINE
lig 19
SAR
D
13 5SARCOSINE
lig 20
ORN
D
15 8L-ORNITHINE
lig 21
ORN
E
1 8L-ORNITHINE
lig 22
PHI
E
4 12IODO-PHENYLALANINE
lig 23
ORN
E
9 8L-ORNITHINE
lig 24
SAR
E
13 5SARCOSINE
lig 25
ORN
E
15 8L-ORNITHINE
lig 26
ORN
F
1 8L-ORNITHINE
lig 27
PHI
F
4 12IODO-PHENYLALANINE
lig 28
ORN
F
9 8L-ORNITHINE
lig 29
SAR
F
13 5SARCOSINE
lig 30
ORN
F
15 8L-ORNITHINE
lig 31
ORN
G
1 8L-ORNITHINE
lig 32
PHI
G
4 12IODO-PHENYLALANINE
lig 33
ORN
G
9 8L-ORNITHINE
lig 34
SAR
G
13 5SARCOSINE
lig 35
ORN
G
15 8L-ORNITHINE
lig 36
ORN
H
1 8L-ORNITHINE
lig 37
PHI
H
4 12IODO-PHENYLALANINE
lig 38
ORN
H
9 8L-ORNITHINE
lig 39
SAR
H
13 5SARCOSINE
lig 40
ORN
H
15 8L-ORNITHINE
lig 41
ORN
I
1 8L-ORNITHINE
lig 42
PHI
I
4 12IODO-PHENYLALANINE
lig 43
ORN
I
9 8L-ORNITHINE
lig 44
SAR
I
13 5SARCOSINE
lig 45
ORN
I
15 8L-ORNITHINE
lig 46
ORN
J
1 8L-ORNITHINE
lig 47
PHI
J
4 12IODO-PHENYLALANINE
lig 48
ORN
J
9 8L-ORNITHINE
lig 49
SAR
J
13 5SARCOSINE
lig 50
ORN
J
15 8L-ORNITHINE
lig 51
ORN
K
1 8L-ORNITHINE
lig 52
PHI
K
4 12IODO-PHENYLALANINE
lig 53
ORN
K
9 8L-ORNITHINE
lig 54
SAR
K
13 5SARCOSINE
lig 55
ORN
K
15 8L-ORNITHINE
lig 56
ORN
L
1 8L-ORNITHINE
lig 57
PHI
L
4 12IODO-PHENYLALANINE
lig 58
ORN
L
9 8L-ORNITHINE
lig 59
SAR
L
13 5SARCOSINE
lig 60
ORN
L
15 8L-ORNITHINE
lig 61
ORN
M
1 8L-ORNITHINE
lig 62
PHI
M
4 12IODO-PHENYLALANINE
lig 63
ORN
M
9 8L-ORNITHINE
lig 64
SAR
M
13 5SARCOSINE
lig 65
ORN
M
15 8L-ORNITHINE
lig 66
ORN
N
1 8L-ORNITHINE
lig 67
PHI
N
4 12IODO-PHENYLALANINE
lig 68
ORN
N
9 8L-ORNITHINE
lig 69
SAR
N
13 5SARCOSINE
lig 70
ORN
N
15 8L-ORNITHINE
lig 71
ORN
O
1 8L-ORNITHINE
lig 72
PHI
O
4 12IODO-PHENYLALANINE
lig 73
ORN
O
9 8L-ORNITHINE
lig 74
SAR
O
13 5SARCOSINE
lig 75
ORN
O
15 8L-ORNITHINE
lig 76
ORN
P
1 8L-ORNITHINE
lig 77
PHI
P
4 12IODO-PHENYLALANINE
lig 78
ORN
P
9 8L-ORNITHINE
lig 79
SAR
P
13 5SARCOSINE
lig 80
ORN
P
15 8L-ORNITHINE
lig 81
NA
A
101 1SODIUM ION
lig 82
CL
B
101 1CHLORIDE ION
lig 83
CL
E
101 1CHLORIDE ION
lig 84
NA
E
102 1SODIUM ION
lig 85
CL
G
101 1CHLORIDE ION
lig 86
CL
H
101 1CHLORIDE ION
lig 87
CL
P
101 1CHLORIDE ION