Analysis of Ligand-Protein Contacts in PDB entry:
4NYA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 4NYA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GTP
A
10 28GUANOSINE-5'-TRIPHOSPHATE
lig 2
CCC
A
89 23CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHA
lig 3
GTP
B
10 32GUANOSINE-5'-TRIPHOSPHATE
lig 4
CCC
B
89 23CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHA
lig 5
MG
A
101 1MAGNESIUM ION
lig 6
MG
A
102 1MAGNESIUM ION
lig 7
MG
A
103 1MAGNESIUM ION
lig 8
MG
A
104 1MAGNESIUM ION
lig 9
MG
A
105 1MAGNESIUM ION
lig 10
MG
A
106 1MAGNESIUM ION
lig 11
MG
A
107 1MAGNESIUM ION
lig 12
MG
A
108 1MAGNESIUM ION
lig 13
MG
A
109 1MAGNESIUM ION
lig 14
2QB
A
110 125-(AZIDOMETHYL)-2-METHYLPYRIMIDIN-4-AMINE
lig 15
MG
B
101 1MAGNESIUM ION
lig 16
MG
B
102 1MAGNESIUM ION
lig 17
MG
B
103 1MAGNESIUM ION
lig 18
MG
B
104 1MAGNESIUM ION
lig 19
MG
B
105 1MAGNESIUM ION
lig 20
MG
B
106 1MAGNESIUM ION
lig 21
2QB
B
107 125-(AZIDOMETHYL)-2-METHYLPYRIMIDIN-4-AMINE