Analysis of Ligand-Protein Contacts in PDB entry:
4NYT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 4NYT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 4
FUC
D
4 10ALPHA-L-FUCOPYRANOSE
lig 5
ACT
C
301 4ACETATE ION
lig 6
CA
C
306 1CALCIUM ION
lig 7
PO4
C
307 5PHOSPHATE ION
lig 8
ACT
A
301 4ACETATE ION
lig 9
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
PC
A
303 11PHOSPHOCHOLINE
lig 11
CA
A
304 1CALCIUM ION
lig 12
CA
A
305 1CALCIUM ION
lig 13
CA
B
301 1CALCIUM ION